RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PGLSO95336 258 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 OTCP00480 354 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 ATP6V1B2P21281 511 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 HTR1EP28566 365 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 SGSHP51688 502 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 TUBA4AP68366 448 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 CDKL1Q00532 357 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 EMX2Q04743 252 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 MAD2L1Q13257 205 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 NFYCQ13952 458 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 MTX3Q5HYI7 312 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 TBCELQ5QJ74 424 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 MPP7Q5T2T1 576 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 TAS2R42Q7RTR8 314 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 SNX20Q7Z614 316 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 PAPD5Q8NDF8 572 aaKnown RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 HM13Q8TCT9 377 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 TMEM125Q96AQ2 219 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 CENPNQ96H22 339 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 CLPBQ9H078 707 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 RNF38Q9H0F5 515 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 GKN1Q9NS71 199 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 ZNF225Q9UK10 706 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 PTBP2Q9UKA9 531 aaKnown RBP12.75□□□□□ -0.37
SHMT2-205ENST00000553474 IKZF3Q9UKT9 509 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 DMTF1Q9Y222 760 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 BTRCQ9Y297 605 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 ZNF510Q9Y2H8 683 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 PCDHB9Q9Y5E1 797 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 PTGDR2Q9Y5Y4 395 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 SCN8AQ9UQD0 1980 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 C7orf72A4D263 438 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 OR1I1O60431 355 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TBL1XO60907 577 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 H6PDO95479 791 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SEC24AO95486 1093 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 OLFM2O95897 454 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 DGKAP23743 735 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CDKN1CP49918 316 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 HK3P52790 923 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 DIO3P55073 304 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SHHQ15465 462 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 C6orf136Q5SQH8 315 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TMTC4Q5T4D3 741 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 HMBOX1Q6NT76 420 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SATL1Q86VE3 508 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CPNE9Q8IYJ1 553 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 GPR65Q8IYL9 337 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TBC1D21Q8IYX1 336 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TRPV3Q8NET8 790 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 POP5Q969H6 163 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 MYO19Q96H55 970 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 PRPF18Q99633 342 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SLC30A3Q99726 388 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SEMA6AQ9H2E6 1030 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TUBA8Q9NY65 449 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 KLHL42Q9P2K6 505 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 GALPQ9UBC7 116 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TIMM22Q9Y584 194 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 COL4A6Q14031 1691 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 OBSL1O75147 1896 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TRBV5-4A0A0C4DH59 114 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ZNF839A8K0R7 811 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ARPC2O15144 300 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 HTRA2O43464 458 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SYNCRIPO60506 623 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CSPG5O95196 566 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 PGM3O95394 542 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 GLUD1P00367 558 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 MBL2P11226 248 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ITGALP20701 1170 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ZFP36L2P47974 494 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 AGTR2P50052 363 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 LSAMPQ13449 338 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CDH18Q13634 790 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 RAB33AQ14088 237 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 NRF1Q16656 503 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 NHSL2Q5HYW2 709 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CDKL4Q5MAI5 379 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 PTRHD1Q6GMV3 140 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ZFAND4Q86XD8 727 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 HID1Q8IV36 788 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 TCEAL8Q8IYN2 117 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms