RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LDLRAP1Q5SW96 308 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 ATG14Q6ZNE5 492 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 RNF31Q96EP0 1072 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 TTC25Q96NG3 672 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 EFHD1Q9BUP0 239 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 FSD1LQ9BXM9 530 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 ULBP3Q9BZM4 244 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A7Q9HAW7 530 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A10Q9HAW8 530 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 UGT1A8Q9HAW9 530 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 EPHA6Q9UF33 1036 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 TUBD1Q9UJT1 453 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 PCDHA13Q9Y5I0 950 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 HECTD1Q9ULT8 2610 aa17.06■□□□□ 0.32
CHMP1A-205ENST00000548650 OR2AG2A6NM03 316 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 KCNJ13O60928 360 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 RASSF9O75901 435 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 RBL1P28749 1068 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 HALP42357 657 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 CCR10P46092 362 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 XRCC4Q13426 336 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 ITGA9Q13797 1035 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 PTPRCAPQ14761 206 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 FAM92BQ6ZTR7 304 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 AMZ2Q86W34 360 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 KLHL6Q8WZ60 621 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 OR6C1Q96RD1 312 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 RAB33BQ9H082 229 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 C10orf88Q9H8K7 445 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 PKP3Q9Y446 797 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 RPS6KL1Q9Y6S9 549 aa17.05■□□□□ 0.32
CHMP1A-205ENST00000548650 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 POP7O75817 140 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 PRAMEF1O95521 474 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 FECHP22830 423 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 F8A1P23610 371 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 CTNNA1P35221 906 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 CSRP3P50461 194 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 KCNC4Q03721 635 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 NFE2L1Q14494 772 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 RPE65Q16518 533 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 ATP1A1-AS1Q5TC04 95 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 IRGCQ6NXR0 463 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 ZDHHC12Q96GR4 267 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 SEMA5BQ9P283 1151 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 PSMD13Q9UNM6 376 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 MRPS18BQ9Y676 258 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
CHMP1A-205ENST00000548650 PJA2O43164 708 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 AGTP01019 485 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 FGF5P12034 268 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 NELFEP18615 380 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 AKT1P31749 480 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 ADRA1AP35348 466 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 GEMP55040 296 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 OLIG2Q13516 323 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 IL11RAQ14626 422 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 CRTC2Q53ET0 693 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 CACHD1Q5VU97 1274 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 ITPRIPL1Q6GPH6 555 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 TMEM220Q6QAJ8 160 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 GALNT6Q8NCL4 622 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 ACTL9Q8TC94 416 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 SLC41A2Q96JW4 573 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
CHMP1A-205ENST00000548650 MACROD2A1Z1Q3 448 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 RCCD1A6NED2 376 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 H7C0C1 242 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 STX7O15400 261 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 ANXA9O76027 345 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 NDUFA10O95299 355 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 MTHFD1P11586 935 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 PSMB4P28070 264 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 PBLDP30039 288 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 PTPN7P35236 360 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 ATP5OP48047 213 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 COPS2P61201 443 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 MC1RQ01726 317 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 SPA17Q15506 151 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 TAF1AQ15573 450 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 LONRF2Q1L5Z9 754 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 FNBP1LQ5T0N5 605 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 DUS1LQ6P1R4 473 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 C6orf15Q6UXA7 325 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 RANBP10Q6VN20 620 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 RASGRP3Q8IV61 690 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 BEND7Q8N7W2 519 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 NAT14Q8WUY8 206 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 ELMO2Q96JJ3 720 aa17.02■□□□□ 0.32
CHMP1A-205ENST00000548650 APOL2Q9BQE5 337 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms