RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 DNASE1P24855 282 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 TAF6P49848 677 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 GALK2Q01415 458 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 FGL1Q08830 312 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 SEMA5AQ13591 1074 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 DYRK1AQ13627 763 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 SCARF1Q14162 830 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 PTGR1Q14914 329 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 POU4F3Q15319 338 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 ZNF773Q6PK81 442 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 CMC1Q7Z7K0 106 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 SYVN1Q86TM6 617 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 ZNF598Q86UK7 904 aaKnown RBP8.55□□□□□ -1.04
ATXN3-216ENST00000545170 ZDHHC21Q8IVQ6 265 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 YAF2Q8IY57 180 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 NKAPQ8N5F7 415 aaKnown RBP8.55□□□□□ -1.04
ATXN3-216ENST00000545170 TBC1D16Q8TBP0 767 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 STK35Q8TDR2 534 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 C7orf34Q96L11 122 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 MMP19Q99542 508 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-216ENST00000545170 COMMD4Q9H0A8 199 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 OSGEPL1Q9H4B0 414 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 DDX4Q9NQI0 724 aaKnown RBP8.55□□□□□ -1.04
ATXN3-216ENST00000545170 ABI2Q9NYB9 513 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-216ENST00000545170 KIAA1257Q9ULG3 409 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 RNF6Q9Y252 685 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 MED14O60244 1454 aa8.55□□□□□ -1.04
ATXN3-216ENST00000545170 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 CYP3A7-CYP3A51PA0A087WV96 503 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 F8VP50 259 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 NDUFB10O96000 172 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 CYP3A7P24462 503 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ATXN1P54253 815 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DAG1Q14118 895 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 NUDT18Q6ZVK8 323 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 SSX9Q7RTT3 188 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 EBNA1BP2Q99848 306 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DHX33Q9H6R0 707 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 SLC7A8Q9UHI5 535 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 OAZ3Q9UMX2 235 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 SHROOM2Q13796 1616 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 E9PI62 339 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 STK25O00506 426 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DNAJA2O60884 412 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ABCB7O75027 752 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TPPPO94811 219 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TGM6O95932 706 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 PROS1P07225 676 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 HK1P19367 917 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 BMP6P22004 513 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 SLC13A2Q13183 592 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ARSKQ6UWY0 536 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TRUB1Q8WWH5 349 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 HSFY1Q96LI6 401 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DNAJB9Q9UBS3 223 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ADGBQ8N7X0 1667 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 LOC100130705A0A1B0GUX0 176 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 C9JVG2 144 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 CBX4O00257 560 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 RYKP34925 604 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 RPL3P39023 403 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TMBIM6P55061 237 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 INSCQ1MX18 579 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 GXYLT1Q4G148 440 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 FBXO43Q4G163 708 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 HLA-DQA1Q5Y7H0 255 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ANKRD54Q6NXT1 300 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 UBQLNLQ8IYU4 475 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 STK40Q8N2I9 435 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 TWIST2Q8WVJ9 160 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 SLC44A1Q8WWI5 657 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 QRFPRQ96P65 431 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 CENPOQ9BU64 300 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 GPRC5CQ9NQ84 441 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ENAMQ9NRM1 1142 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 EBF1Q9UH73 591 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 MRPL42Q9Y6G3 142 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 MCIDASD6RGH6 385 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 INMTO95050 263 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 LDOC1O95751 146 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 BPNT1O95861 308 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 IFNA21P01568 189 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 RHOCP08134 193 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ZNF543Q08ER8 600 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 BTN1A1Q13410 526 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 VTCN1Q7Z7D3 282 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 DCP1BQ8IZD4 617 aaKnown RBP8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ZNF781Q8N8C0 355 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 PSD4Q8NDX1 1056 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 LILRB4Q8NHJ6 448 aa8.54□□□□□ -1.04
ATXN3-216ENST00000545170 ZFP28Q8NHY6 868 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms