RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
COPS7A-220ENST00000544725 NFKBIL1Q9UBC1 381 aaPredicted RBP14.28□□□□□ -0.12
COPS7A-220ENST00000544725 COPG1Q9Y678 874 aaKnown RBP14.28□□□□□ -0.12
COPS7A-220ENST00000544725 SETD2Q9BYW2 2564 aaPredicted RBP14.28□□□□□ -0.12
COPS7A-220ENST00000544725 ARHGAP10A1A4S6 786 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 KLHL41O60662 606 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 MTX2O75431 263 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 ZBTB11O95625 1053 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-220ENST00000544725 TCF4P15884 667 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 CCNCP24863 283 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 PER3P56645 1201 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 GALNT2Q10471 571 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 RAPSNQ13702 412 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 KRT81Q14533 505 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 PLCL1Q15111 1095 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 GPR19Q15760 415 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.13
COPS7A-220ENST00000544725 KYNUQ16719 465 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 PLEKHS1Q5SXH7 462 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 CCDC122Q5T0U0 273 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 LYPLAL1Q5VWZ2 237 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 IRF2BP2Q7Z5L9 587 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 RAB43Q86YS6 212 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 TRAPPC5Q8IUR0 188 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 DSELQ8IZU8 1212 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 ZBTB2Q8N680 514 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 SLC38A9Q8NBW4 561 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 ANKRD20A12PQ8NF67 263 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 ZNF653Q96CK0 615 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 EID2BQ96D98 161 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 RUBCNLQ9H714 662 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 WDR37Q9Y2I8 494 aa14.27□□□□□ -0.13
COPS7A-220ENST00000544725 F8P00451 2351 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 OR5K3A6NET4 321 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 LGALS16A8MUM7 142 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 F5H423 210 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-220ENST00000544725 MFSD11O43934 449 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 KCNJ13O60928 360 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 FTLP02792 175 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-220ENST00000544725 ALPPP05187 535 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 HLA-DQB2P05538 268 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 PRF1P14222 555 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 UBXN1Q04323 297 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 ATP1A4Q13733 1029 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 GTF2H3Q13889 308 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 LCN10Q6JVE6 187 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 C11orf96Q7Z7L8 435 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 CARFQ8N187 725 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 TTC30BQ8N4P2 665 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 GPR150Q8NGU9 434 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 TM9SF4Q92544 642 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 CLIP3Q96DZ5 547 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 TRIM11Q96F44 468 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 FANCEQ9HB96 536 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 AGPAT4Q9NRZ5 378 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 HRASLS2Q9NWW9 162 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 SOHLH2Q9NX45 425 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 PDZD2O15018 2839 aa14.26□□□□□ -0.13
COPS7A-220ENST00000544725 AKAP9Q99996 3911 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 MYBL1P10243 752 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 GZMAP12544 262 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 RORAP35398 523 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 CD86P42081 329 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 PIGHQ14442 188 aaPredicted RBP14.25□□□□□ -0.13
COPS7A-220ENST00000544725 RPE65Q16518 533 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 FAM69BQ5VUD6 431 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 TXNRD3NBQ6F5E7 133 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 ARMC6Q6NXE6 501 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 OOSP2Q86WS3 158 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 ST6GALNAC3Q8NDV1 305 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 IP6K3Q96PC2 410 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 TSGA13Q96PP4 275 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 VPS35Q96QK1 796 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 BARD1Q99728 777 aaKnown RBP14.25□□□□□ -0.13
COPS7A-220ENST00000544725 FANCLQ9NW38 375 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 SHOC2Q9UQ13 582 aa14.25□□□□□ -0.13
COPS7A-220ENST00000544725 DIDO1Q9BTC0 2240 aaKnown RBP14.25□□□□□ -0.13
COPS7A-220ENST00000544725 SLC4A1P02730 911 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 CAPN1P07384 714 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 MMP2P08253 660 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 GRNP28799 593 aaKnown RBP14.24□□□□□ -0.13
COPS7A-220ENST00000544725 GLRBP48167 497 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 TMEM115Q12893 351 aaPredicted RBP14.24□□□□□ -0.13
COPS7A-220ENST00000544725 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 GALNT3Q14435 633 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 PAFAH1B3Q15102 231 aaKnown RBP14.24□□□□□ -0.13
COPS7A-220ENST00000544725 KHDC1Q4VXA5 237 aaKnown RBP14.24□□□□□ -0.13
COPS7A-220ENST00000544725 CRB2Q5IJ48 1285 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 NCBP2-AS2Q69YL0 99 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 SP5Q6BEB4 398 aaPredicted RBP14.24□□□□□ -0.13
COPS7A-220ENST00000544725 FAM198BQ6UWH4 519 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 IGFL3Q6UXB1 125 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 TMC3Q7Z5M5 1100 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 AMZ2Q86W34 360 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 SYTL1Q8IYJ3 562 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 ZADH2Q8N4Q0 377 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 CLEC1AQ8NC01 280 aa14.24□□□□□ -0.13
COPS7A-220ENST00000544725 GDAP1Q8TB36 358 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms