RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SPIBQ01892 262 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 RBM44Q6ZP01 1051 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CUZD1Q86UP6 607 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 OR10G6Q8NH81 332 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SELENOMQ8WWX9 145 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 NTAN1Q96AB6 310 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GPATCH2LQ9NWQ4 482 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GIN1Q9NXP7 522 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 A0A1W2PQ72 361 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FAM234BA2RU67 622 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 E5RJQ4 531 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CBX4O00257 560 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GSC2O15499 205 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 NRP2O60462 931 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GLRBP48167 497 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MAPK10P53779 464 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PLGLB1Q02325 96 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FGD3Q5JSP0 725 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 TREML2Q5T2D2 321 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 THOC7Q6I9Y2 204 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ZCCHC12Q6PEW1 402 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SLC30A10Q6XR72 485 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 TRPV3Q8NET8 790 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 AIF1LQ9BQI0 150 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MGME1Q9BQP7 344 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CYP4F12Q9HCS2 524 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 EURLQ9NYK6 297 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CNOT11Q9UKZ1 510 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 TDRKHQ9Y2W6 561 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 TCAF1Q9Y4C2 921 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 DUSP10Q9Y6W6 482 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ANKRD63C9JTQ0 380 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 NR2F6P10588 404 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 NR2C1P13056 603 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FEN1P39748 380 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MPP1Q00013 466 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 BLMHQ13867 455 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FUT10Q6P4F1 479 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 P4HA3Q7Z4N8 544 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GPR156Q8NFN8 814 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SLC2A14Q8TDB8 520 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PHF10Q8WUB8 498 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PPCDCQ96CD2 204 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SECISBP2Q96T21 854 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SHCBP1LQ9BZQ2 653 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GLOD4Q9HC38 313 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CHST7Q9NS84 486 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ZIM2Q9NZV7 527 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 OR12D3Q9UGF7 316 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CDC14AQ9UNH5 594 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SNX8Q9Y5X2 465 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 COLEC10Q9Y6Z7 277 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CNR2P34972 360 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SPAM1P38567 509 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GJA9P57773 515 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GHRHRQ02643 423 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ADGRE1Q14246 886 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 POU6F1Q14863 301 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PDCD4Q53EL6 469 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 TPGS1Q6ZTW0 290 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MON1AQ86VX9 555 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FAM131BQ86XD5 332 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ZZZ3Q8IYH5 903 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF671Q8TAW3 534 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ASZ1Q8WWH4 475 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 RHBDF1Q96CC6 855 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 VPS35Q96QK1 796 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 P2RY13Q9BPV8 354 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MAGEH1Q9H213 219 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 FZD10Q9ULW2 581 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PADI3Q9ULW8 664 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 DLG5Q8TDM6 1919 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 A0A087X0B3 334 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 IRAK2O43187 625 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 CSDE1O75534 798 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 OR6B1O95007 311 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 RPLP0P05388 317 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PGRP06401 933 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ADRB2P07550 413 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PRG2P13727 222 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 OMPP47874 163 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 IL10RBQ08334 325 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 MACC1Q6ZN28 852 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 RANBP3LQ86VV4 465 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 JAZF1Q86VZ6 243 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ERI1Q8IV48 349 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ZC3H3Q8IXZ2 948 aaKnown RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ING5Q8WYH8 240 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ELMO1Q92556 727 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 VMP1Q96GC9 406 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 PHF7Q9BWX1 381 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-211ENST00000543710 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ALKBH4Q9NXW9 302 aa7.74□□□□□ -1.17
VPS13D-211ENST00000543710 ANKRD65E5RJM6 399 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 M0QX08 132 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 BCKDKO14874 412 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SLC19A2O60779 497 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms