RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 PRAMEP78395 509 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CAV1Q03135 178 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CACNG1Q06432 222 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 BNIP3Q12983 259 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 PDIA2Q13087 525 aaKnown RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 SEMA3AQ14563 771 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CRYMQ14894 314 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 DBN1Q16643 649 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 GPR33Q49SQ1 333 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 PYCR3Q53H96 274 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 ZRANB3Q5FWF4 1079 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 LDLRAP1Q5SW96 308 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 STEAP4Q687X5 459 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CASC4Q6P4E1 433 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 HID1Q8IV36 788 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 PNPLA1Q8N8W4 532 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 ZNF548Q8NEK5 533 aaPredicted RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 SAP25Q8TEE9 199 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 ULK4Q96C45 1275 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 LRRC39Q96DD0 335 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 EBNA1BP2Q99848 306 aaKnown RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 OR2AG1Q9H205 316 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CYP4F12Q9HCS2 524 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 FAM114A2Q9NRY5 505 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 TM7SF3Q9NS93 570 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 UCKL1Q9NWZ5 548 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 MARCH4Q9P2E8 410 aaPredicted RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 APOBEC3BQ9UH17 382 aaKnown RBP10.42□□□□□ -0.74
DDX11-225ENST00000543511 CRLS1Q9UJA2 301 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 SUFUQ9UMX1 484 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 CHMP2BQ9UQN3 213 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 PCDHGB2Q9Y5G2 931 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 RPS6KL1Q9Y6S9 549 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 LAMA1P25391 3075 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 FRYLO94915 3013 aa10.42□□□□□ -0.74
DDX11-225ENST00000543511 MAGEB16A2A368 324 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 C4orf47A7E2U8 309 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 GPR89AB7ZAQ6 455 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 H3BM21 787 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 EIF3HO15372 352 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX11-225ENST00000543511 SGTAO43765 313 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 VEGFDO43915 354 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 NUAK1O60285 661 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 VAPBO95292 243 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 ASMTLO95671 621 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 GPR89BP0CG08 455 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 GIMD1P0DJR0 217 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 CD59P13987 128 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 DGKAP23743 735 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 ACRV1P26436 265 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 GNPDA1P46926 289 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 ATXN3P54252 364 aaPredicted RBP10.41□□□□□ -0.74
DDX11-225ENST00000543511 HNRNPKP61978 463 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX11-225ENST00000543511 SMAD1Q15797 465 aaKnown RBP10.41□□□□□ -0.74
DDX11-225ENST00000543511 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
DDX11-225ENST00000543511 STPG1Q5TH74 334 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 UNC5AQ6ZN44 842 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 DBX2Q6ZNG2 339 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 MARK2Q7KZI7 788 aaKnown RBP10.41□□□□□ -0.74
DDX11-225ENST00000543511 RD3Q7Z3Z2 195 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 SERPINA9Q86WD7 417 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 GATAD2AQ86YP4 633 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 ZNF547Q8IVP9 402 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 RASGEF1AQ8N9B8 481 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 OR6P1Q8NGX9 317 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 OR4L1Q8NH43 312 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 NAT14Q8WUY8 206 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 PMEPA1Q969W9 287 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 OR2M4Q96R27 311 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 BOCQ9BWV1 1114 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 FAM129AQ9BZQ8 928 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 CLPBQ9H078 707 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 CARS2Q9HA77 564 aaKnown RBP10.41□□□□□ -0.74
DDX11-225ENST00000543511 IL1RAPL1Q9NZN1 696 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 ST14Q9Y5Y6 855 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 BPTFQ12830 3046 aa10.41□□□□□ -0.74
DDX11-225ENST00000543511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.4□□□□□ -0.74
DDX11-225ENST00000543511 PRR19A6NJB7 356 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 TTC4O95801 387 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 TNFP01375 233 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 THBS1P07996 1170 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 RHOXF2BP0C7M4 288 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 PAMP19021 973 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 BLKP51451 505 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 CTSCP53634 463 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 TMEM115Q12893 351 aaPredicted RBP10.4□□□□□ -0.74
DDX11-225ENST00000543511 ITIH4Q14624 930 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 LONRF1Q17RB8 773 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 TYSND1Q2T9J0 566 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 PRRT3Q5FWE3 981 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 SPANXN3Q5MJ09 141 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 TEX35Q5T0J7 233 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 CRTC3Q6UUV7 619 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 NXPE4Q6UWF7 544 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 PACS1Q6VY07 963 aa10.4□□□□□ -0.74
DDX11-225ENST00000543511 CENPUQ71F23 418 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms