RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ERVK-6Q9BXR3 956 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 TUBB1Q9H4B7 451 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 TLR9Q9NR96 1032 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 RGS18Q9NS28 235 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 FAM118AQ9NWS6 357 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 ST3GAL5Q9UNP4 418 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 PCDHB7Q9Y5E2 793 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 NOX1Q9Y5S8 564 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 U3KQV3 271 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 SCN1AP35498 2009 aa5.26□□□□□ -1.57
KDM3B-209ENST00000542866 SNPHO15079 494 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 MSI1O43347 362 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ADAMTS4O75173 837 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SLC22A3O75751 556 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CNTN5O94779 1100 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 C1RP00736 705 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CST1P01037 141 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TGM1P22735 817 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CST5P28325 142 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 PIGAP37287 484 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CLCN5P51795 746 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TSPY1Q01534 308 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 KCNAB2Q13303 367 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TAF12Q16514 161 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CTU2Q2VPK5 515 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 AKAP14Q86UN6 197 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 PLD3Q8IV08 490 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 POC5Q8NA72 575 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CHDHQ8NE62 594 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CNIH3Q8TBE1 160 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CALML6Q8TD86 181 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 HDAC2Q92769 488 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ESAMQ96AP7 390 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ITCHQ96J02 903 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 HGH1Q9BTY7 390 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 COLEC11Q9BWP8 271 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 MARCH7Q9H992 704 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 NTN4Q9HB63 628 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 WDR6Q9NNW5 1121 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 AKIP1Q9NQ31 210 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ENTPD7Q9NQZ7 604 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SDR39U1Q9NRG7 319 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 GDAP2Q9NXN4 497 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 LIMD1Q9UGP4 676 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 LEF1Q9UJU2 399 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ZFC3H1O60293 1989 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 EVPLQ92817 2033 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 A0A1B0GTL3 188 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CCDC162PA2VCL2 907 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 FAM47E-STBD1D6RA91 191 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 HOXA2O43364 376 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ASNA1O43681 348 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SNX2O60749 519 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 RECQL4O94761 1208 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CYBBP04839 570 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ALPLP05186 524 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 FYNP06241 537 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 HTR1AP08908 422 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CDH1P12830 882 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 POLR2JP52435 117 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 GP2P55259 537 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 MAXP61244 160 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 NCS1P62166 190 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CTF1Q16619 201 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 FAM187BQ17R55 369 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 DPY19L1Q2PZI1 675 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ADPRMQ3LIE5 342 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 PLA2G4EQ3MJ16 856 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TRIM60Q495X7 471 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ATAD3BQ5T9A4 648 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 KIAA0930Q6ICG6 404 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SULT1C3Q6IMI6 304 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 UGT3A1Q6NUS8 523 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TFAP2DQ7Z6R9 452 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 OSTM1Q86WC4 334 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 METTL23Q86XA0 190 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ARMC8Q8IUR7 673 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 LGI2Q8N0V4 545 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 LRRC52Q8N7C0 313 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 MINDY2Q8NBR6 621 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 VPS37AQ8NEZ2 397 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 NUDT8Q8WV74 236 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 NT5C3BQ969T7 300 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 EFHD2Q96C19 240 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ZNF641Q96N77 438 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ACOX2Q99424 681 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 CTRCQ99895 268 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 PSD2Q9BQI7 771 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 C17orf80Q9BSJ5 609 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 KATNBL1Q9H079 304 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 NXF3Q9H4D5 531 aaKnown RBP5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ITM2CQ9NQX7 267 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SHROOM3Q8TF72 1996 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 SIP14410 1827 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 TBX1O43435 398 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 FTH1P02794 183 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 HLA-DQB2P05538 268 aa5.25□□□□□ -1.57
KDM3B-209ENST00000542866 ANXA6P08133 673 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms