RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 TAF1AQ15573 450 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 LYPLAL1Q5VWZ2 237 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CYP20A1Q6UW02 462 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 TPGS1Q6ZTW0 290 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 GLB1L3Q8NCI6 653 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PRICKLE1Q96MT3 831 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 GPATCH1Q9BRR8 931 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MEAF6Q9HAF1 191 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 DNAAF2Q9NVR5 837 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CNOT11Q9UKZ1 510 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 HMX2A2RU54 273 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 SNTNA6NMZ2 147 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 FAM220BPB1ANY3 271 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CXCR6O00574 342 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MAFKO60675 156 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 IL6P05231 212 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 GSTM1P09488 218 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CDH1P12830 882 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 RPIAP49247 311 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ATP4BP51164 291 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 DGKQP52824 942 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CACNG1Q06432 222 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PPP1R8Q12972 351 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CBX3Q13185 183 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PTPRCAPQ14761 206 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 NCF4Q15080 339 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF829Q3KNS6 432 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 DET1Q7L5Y6 550 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 GPRIN1Q7Z2K8 1008 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 C11orf96Q7Z7L8 435 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CYP4Z1Q86W10 505 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 SVOPLQ8N434 492 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 TSPEARQ8WU66 669 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 TMBIM1Q969X1 311 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 BIRC7Q96CA5 298 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MTERF3Q96E29 417 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 FBXL20Q96IG2 436 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 IL12RB2Q99665 862 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MRPL9Q9BYD2 267 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ENPP3O14638 875 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 RGS10O43665 173 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 CLDN9O95484 217 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 EPOP01588 193 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ALOX5P09917 674 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 OR1D2P34982 312 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 HPCAL1P37235 193 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 SNRPD1P62314 119 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MRPL28Q13084 256 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 RANBP10Q6VN20 620 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 C14orf80Q86SX3 495 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 ANKRD46Q86W74 232 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 NELL1Q92832 810 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PDP1Q9P0J1 537 aaPredicted RBP8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 PSME2Q9UL46 239 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 MAPRE3Q9UPY8 281 aa8.11□□□□□ -1.11
PRKAB1-207ENST00000542698 SUV39H1O43463 412 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 NDUFS2O75306 463 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CNTN5O94779 1100 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 PRAMEF1O95521 474 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 PENKP01210 267 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ACVRL1P37023 503 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 STC1P52823 247 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CDH4P55283 916 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CYP4F3Q08477 520 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SMARCB1Q12824 385 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 PHKG1Q16816 387 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 UNC50Q53HI1 259 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 FGD3Q5JSP0 725 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 OGFOD2Q6N063 350 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CHST15Q7LFX5 561 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ITIH5Q86UX2 942 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 RASAL3Q86YV0 1011 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ZDHHC21Q8IVQ6 265 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 DEPDC4Q8N2C3 294 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ELMO1Q92556 727 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 WDR6Q9NNW5 1121 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TMEM9Q9P0T7 183 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ZFP37Q9Y6Q3 630 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 A0A1B0GVM2 712 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TOR1BO14657 336 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 KPNA5O15131 536 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 FFAR2O15552 330 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 TFAP2AP05549 437 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 AQP1P29972 269 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 WEE1P30291 646 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 CORO1AP31146 461 aaKnown RBP8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 GGT5P36269 586 aa8.1□□□□□ -1.11
PRKAB1-207ENST00000542698 ALDH9A1P49189 494 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms