RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 WBP2Q969T9 261 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 RNF145Q96MT1 663 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ZNF641Q96N77 438 aaPredicted RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 NPY6RQ99463 290 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 FICDQ9BVA6 458 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CHID1Q9BWS9 393 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 TUBB1Q9H4B7 451 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 EHD1Q9H4M9 534 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ALG2Q9H553 416 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 INTS7Q9NVH2 962 aaKnown RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 PAK1IP1Q9NWT1 392 aaPredicted RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 RCOR3Q9P2K3 495 aaPredicted RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 PCDHGA11Q9Y5H2 935 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 OAS3Q9Y6K5 1087 aaKnown RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 PMF1-BGLAPU3KQ54 211 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SPEGQ15772 3267 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 MYLKQ15746 1914 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 NOBOXO60393 691 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ABCB7O75027 752 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 GJB5O95377 273 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ALBP02768 609 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 HSD17B1P14061 328 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 GSSP48637 474 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 NPY2RP49146 381 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 GP2P55259 537 aaKnown RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 OR4D2P58180 307 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 TPI1P60174 286 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SLC13A2Q13183 592 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 LAPTM5Q13571 262 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 PSMD5Q16401 504 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CTF1Q16619 201 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 UNC50Q53HI1 259 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 RAB41Q5JT25 222 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CATSPEREQ5SY80 951 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 GPR158Q5T848 1215 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 DENND5AQ6IQ26 1287 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ZDHHC17Q8IUH5 632 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CFAP52Q8N1V2 620 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CLIP4Q8N3C7 705 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 MFSD4AQ8N468 514 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SFRP1Q8N474 314 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SDCCAG3Q96C92 435 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 TMEM169Q96HH4 297 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ITCHQ96J02 903 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 TUBA1CQ9BQE3 449 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 CARS2Q9HA77 564 aaKnown RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 SMURF2Q9HAU4 748 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SLC52A3Q9NQ40 469 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
THBS3-211ENST00000541990 MTRRQ9UBK8 725 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 SUN2Q9UH99 717 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 ACTL7AQ9Y615 435 aa9.04□□□□□ -0.96
THBS3-211ENST00000541990 RALGAPA2Q2PPJ7 1873 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PSMD11O00231 422 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 LDLRP01130 860 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 RPLP2P05387 115 aaKnown RBP9.03□□□□□ -0.96
THBS3-211ENST00000541990 LINC00032P0C843 101 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 JUNBP17275 347 aaPredicted RBP9.03□□□□□ -0.96
THBS3-211ENST00000541990 ACADSBP45954 432 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 KCNQ1P51787 676 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 IFITM2Q01629 132 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 TIGD2Q4W5G0 525 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 SCIMPQ6UWF3 145 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 SLCO6A1Q86UG4 719 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 RALGPS2Q86X27 583 aaPredicted RBP9.03□□□□□ -0.96
THBS3-211ENST00000541990 CNTN4Q8IWV2 1026 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 KIAA2013Q8IYS2 634 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 LGI2Q8N0V4 545 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 DPF3Q92784 378 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 FBXO32Q969P5 355 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PTERQ96BW5 349 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 BIRC7Q96CA5 298 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 TEKT5Q96M29 485 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 SLC22A12Q96S37 553 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 MIR1-1HGQ9H1L0 117 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 CSNK1G1Q9HCP0 422 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 ANAPC2Q9UJX6 822 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 FBXO5Q9UKT4 447 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 NDUFAF1Q9Y375 327 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 HIDE1A8MVS5 230 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PFDN6O15212 129 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 HADHAP40939 763 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 ARSFP54793 590 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PLD1Q13393 1074 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 NFYCQ13952 458 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 ZNF846Q147U1 533 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 THOC7Q6I9Y2 204 aaKnown RBP9.03□□□□□ -0.96
THBS3-211ENST00000541990 SLC22A16Q86VW1 577 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 ANKRD13BQ86YJ7 626 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 MINDY1Q8N5J2 469 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
THBS3-211ENST00000541990 UROC1Q96N76 676 aa9.03□□□□□ -0.96
THBS3-211ENST00000541990 KCTD14Q9BQ13 255 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms