RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SPATA16Q9BXB7 569 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 IQCGQ9H095 443 aaKnown RBP7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 CCDC134Q9H6E4 229 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 NKIRAS1Q9NYS0 192 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 IKZF3Q9UKT9 509 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 MED16Q9Y2X0 877 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 SLC30A1Q9Y6M5 507 aa7.65□□□□□ -1.18
AC005840.3-201ENST00000541888 J3QW42 95 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SCAMP1O15126 338 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PRPF4O43172 522 aaKnown RBP eCLIP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 NDUFS3O75489 264 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 RNASEH2AO75792 299 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 ASMTLO95671 621 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 VIMP08670 466 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CCDC166P0CW27 439 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HOXB2P14652 356 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 STMN1P16949 149 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CCND1P24385 295 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 MAT2AP31153 395 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CCNFP41002 786 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 ETV4P43268 484 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PXNP49023 591 aaPredicted RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SPINT3P49223 89 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SERPINB9P50453 376 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 COPAP53621 1224 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SLC18A2Q05940 514 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 OVGP1Q12889 678 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 NFATC2Q13469 925 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 EIF4HQ15056 248 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 RASA2Q15283 850 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SETMARQ53H47 684 aaPredicted RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 RALGPS1Q5JS13 557 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HABP4Q5JVS0 413 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 LGSNQ5TDP6 509 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HHATQ5VTY9 493 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SEL1L3Q68CR1 1132 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 MRNIPQ6NTE8 343 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 BRAT1Q6PJG6 821 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 LIPIQ6XZB0 460 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 NLRP9Q7RTR0 991 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CPLX4Q7Z7G2 160 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 LRRC34Q8IZ02 419 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 FRMD1Q8N878 549 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 GBP7Q8N8V2 638 aaPredicted RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PLA2G15Q8NCC3 412 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 GANCQ8TET4 914 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 UCMAQ8WVF2 138 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 LPGAT1Q92604 370 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 GPR21Q99679 349 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PLCD4Q9BRC7 762 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SHCBP1LQ9BZQ2 653 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 FOXQ1Q9C009 403 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 FZD3Q9NPG1 666 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 FGFR1OP2Q9NVK5 253 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 BAIAP2L1Q9UHR4 511 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CRLS1Q9UJA2 301 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 A0A1W2PQF6 199 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 OR2AG2A6NM03 316 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 H3BMM5 538 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 TIMM44O43615 452 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SYNCRIPO60506 623 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 LYPLA1O75608 230 aaPredicted RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PRNPP04156 253 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SBK3P0C264 359 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 VIPR1P32241 457 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SPAM1P38567 509 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SLC12A2P55011 1212 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 TAS2R38P59533 333 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 RAB10P61026 200 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 B4GALNT1Q00973 533 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 BLMHQ13867 455 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CST6Q15828 149 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SEPT7Q16181 437 aaKnown RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 TYSND1Q2T9J0 566 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PIP5KL1Q5T9C9 394 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PAQR3Q6TCH7 311 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HDDC3Q8N4P3 179 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 AGR3Q8TD06 166 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 ZNF398Q8TD17 642 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 ZFAND2BQ8WV99 257 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HEXDCQ8WVB3 486 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 FAM3CQ92520 227 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 ITFG2Q969R8 447 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 MTBPQ96DY7 904 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 SCYL1Q96KG9 808 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 NECAB3Q96P71 396 aaPredicted RBP7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 C1QTNF1Q9BXJ1 281 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 C20orf27Q9GZN8 174 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PPCSQ9HAB8 311 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CYP4F12Q9HCS2 524 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 HACD3Q9P035 362 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 CIDEBQ9UHD4 219 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PLLPQ9Y342 182 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 PRKAB1Q9Y478 270 aa7.64□□□□□ -1.19
AC005840.3-201ENST00000541888 KNL1Q8NG31 2342 aa7.63□□□□□ -1.19
AC005840.3-201ENST00000541888 TMEM202A6NGA9 273 aa7.63□□□□□ -1.19
AC005840.3-201ENST00000541888 IGLON5A6NGN9 336 aa7.63□□□□□ -1.19
AC005840.3-201ENST00000541888 LRRC14BA6NHZ5 514 aa7.63□□□□□ -1.19
AC005840.3-201ENST00000541888 NCF1BA6NI72 391 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms