RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SFMBT2Q5VUG0 894 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 ANO5Q75V66 913 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 FOXP4Q8IVH2 680 aaPredicted RBP5.63□□□□□ -1.51
YBX3-210ENST00000540975 FTOQ9C0B1 505 aaKnown RBP eCLIP5.63□□□□□ -1.51
YBX3-210ENST00000540975 SEMA6AQ9H2E6 1030 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 ZNF696Q9H7X3 374 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 ZBTB20Q9HC78 741 aaPredicted RBP5.63□□□□□ -1.51
YBX3-210ENST00000540975 EIF2B3Q9NR50 452 aaKnown RBP5.63□□□□□ -1.51
YBX3-210ENST00000540975 PAG1Q9NWQ8 432 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 NENFQ9UMX5 172 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 JRKLQ9Y4A0 524 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 CAVIN2O95810 425 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 TUBBP07437 444 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 INHBAP08476 426 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 CLTBP09497 229 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 MSH3P20585 1137 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 TUBB4BP68371 445 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 CCDC6Q16204 474 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 ASPRV1Q53RT3 343 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 CEP85LQ5SZL2 805 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 ZDHHC20Q5W0Z9 365 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 PTOV1Q86YD1 416 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 STPG4Q8N801 248 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 C1QTNF1Q9BXJ1 281 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 ITIH6Q6UXX5 1313 aa5.62□□□□□ -1.51
YBX3-210ENST00000540975 TEX13DA0A0J9YY54 714 aaPredicted RBP5.61□□□□□ -1.51
YBX3-210ENST00000540975 SMCHD1A6NHR9 2005 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
YBX3-210ENST00000540975 PTP4A3O75365 173 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 TPPPO94811 219 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 BAIAP3O94812 1187 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 GH2P01242 217 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 PON1P27169 355 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 NR2C2P49116 596 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 KRTAP27-1Q3LI81 207 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 NDUFAF5Q5TEU4 345 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 C1orf122Q6ZSJ8 110 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 TTC39CQ8N584 583 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 CNBD1Q8NA66 436 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 FAM76AQ8TAV0 307 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 FCAMRQ8WWV6 532 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 TM9SF4Q92544 642 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 MOAP1Q96BY2 351 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 DACH2Q96NX9 599 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 SRSF8Q9BRL6 282 aaKnown RBP5.61□□□□□ -1.51
YBX3-210ENST00000540975 POLR3GLQ9BT43 218 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 ZHX3Q9H4I2 956 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 APOBEC3GQ9HC16 384 aaKnown RBP5.61□□□□□ -1.51
YBX3-210ENST00000540975 SLC38A7Q9NVC3 462 aa5.61□□□□□ -1.51
YBX3-210ENST00000540975 DDX43Q9NXZ2 648 aaKnown RBP5.61□□□□□ -1.51
YBX3-210ENST00000540975 PLK4O00444 970 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 PCDH7O60245 1069 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 GCNT3O95395 438 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 ARF3P61204 181 aaPredicted RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 ARF1P84077 181 aaKnown RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 PPP2R2BQ00005 443 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 GAGE2BQ13066 116 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 GAGE2AQ6NT46 116 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 GALNT13Q8IUC8 556 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 ARID3BQ8IVW6 561 aaPredicted RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 ADGRF2Q8IZF7 708 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 TRIM58Q8NG06 486 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 SMPDL3BQ92485 455 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 PRMT6Q96LA8 375 aaPredicted RBP5.6□□□□□ -1.51
YBX3-210ENST00000540975 PTTG2Q9NZH5 202 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 ACAD8Q9UKU7 415 aa5.6□□□□□ -1.51
YBX3-210ENST00000540975 PTGES3LE9PB15 166 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 BLOC1S5-TXNDC5H3BN57 136 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 CIDEAO60543 219 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 RB1P06400 928 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 CAPN3P20807 821 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 HADHAP40939 763 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 RXRGP48443 463 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 MMP15P51511 669 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 TMEM30BQ3MIR4 351 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 ARHGAP17Q68EM7 881 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 SCYL3Q8IZE3 742 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 ZNF473Q8WTR7 871 aaKnown RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 SKA1Q96BD8 255 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 SLC22A12Q96S37 553 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 BICC1Q9H694 974 aaKnown RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 DENND2DQ9H6A0 471 aaPredicted RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 MBNL1Q9NR56 388 aaKnown RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 ZNF624Q9P2J8 865 aaPredicted RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 PNMA2Q9UL42 364 aa5.59□□□□□ -1.51
YBX3-210ENST00000540975 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.59□□□□□ -1.51
YBX3-210ENST00000540975 CDRT15L2A8MXV6 281 aa5.58□□□□□ -1.52
YBX3-210ENST00000540975 EDIL3O43854 480 aa5.58□□□□□ -1.52
YBX3-210ENST00000540975 ZG16O60844 167 aa5.58□□□□□ -1.52
YBX3-210ENST00000540975 CGAP01215 116 aa5.58□□□□□ -1.52
YBX3-210ENST00000540975 NR3C1P04150 777 aa5.58□□□□□ -1.52
YBX3-210ENST00000540975 GARSP41250 739 aaKnown RBP5.58□□□□□ -1.52
YBX3-210ENST00000540975 NR0B1P51843 470 aaKnown RBP5.58□□□□□ -1.52
YBX3-210ENST00000540975 MRPS5P82675 430 aaKnown RBP5.58□□□□□ -1.52
YBX3-210ENST00000540975 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms