RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FTH1P02794 183 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 INHBAP08476 426 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 NME1P15531 152 aaKnown RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 GABRB3P28472 473 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 MSH2P43246 934 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 ARRB1P49407 418 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 PRLHRP49683 370 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 CTSCP53634 463 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 ATXN3P54252 364 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 HNRNPKP61978 463 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDB1-216ENST00000539739 EFTUD2Q15029 972 aaKnown RBP eCLIP15.2■□□□□ 0.029e-8■■■□□ 16.2
DDB1-216ENST00000539739 UAP1Q16222 522 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 ZNF542PQ5EBM4 170 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 ZNF789Q5FWF6 425 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 GRTP1Q5TC63 336 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 CRTC3Q6UUV7 619 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 MRRFQ96E11 262 aaKnown RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 CCDC97Q96F63 343 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 PANX3Q96QZ0 392 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 OR2M4Q96R27 311 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 ELF4Q99607 663 aaPredicted RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 TRNAU1APQ9NX07 287 aaKnown RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 APOBEC3BQ9UH17 382 aaKnown RBP15.2■□□□□ 0.02
DDB1-216ENST00000539739 PRSS21Q9Y6M0 314 aa15.2■□□□□ 0.02
DDB1-216ENST00000539739 POC1B-GALNT4F8VUJ3 575 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 CER1O95813 267 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 FUCA1P04066 466 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 F7P08709 466 aaPredicted RBP15.19■□□□□ 0.02
DDB1-216ENST00000539739 GSTM1P09488 218 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 ZNF806P0C7X5 589 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 VCLP18206 1134 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 IRX4P78413 519 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 BNC1Q01954 994 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 GSTM4Q03013 218 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 INSCQ1MX18 579 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 BEND6Q5SZJ8 279 aaPredicted RBP15.19■□□□□ 0.02
DDB1-216ENST00000539739 CHST15Q7LFX5 561 aaPredicted RBP15.19■□□□□ 0.02
DDB1-216ENST00000539739 ZC3HC1Q86WB0 502 aaKnown RBP15.19■□□□□ 0.02
DDB1-216ENST00000539739 BIRC8Q96P09 236 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 RHOJQ9H4E5 214 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 SMOC1Q9H4F8 434 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 PNMA8BQ9ULN7 279 aaPredicted RBP15.19■□□□□ 0.02
DDB1-216ENST00000539739 PRKAB1Q9Y478 270 aa15.19■□□□□ 0.02
DDB1-216ENST00000539739 E5RI56 91 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 PROB1E7EW31 1015 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 YKT6O15498 198 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 SGTAO43765 313 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 KCNJ13O60928 360 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 POP7O75817 140 aaKnown RBP15.18■□□□□ 0.02
DDB1-216ENST00000539739 TRIM16O95361 564 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 CHRM3P20309 590 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 RXRGP48443 463 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 IFFO1Q0D2I5 559 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 LRP8Q14114 963 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 PDCD2Q16342 344 aaPredicted RBP15.18■□□□□ 0.02
DDB1-216ENST00000539739 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 HLA-BQ31612 363 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 PRAMEF14Q5SWL7 426 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 KCTD16Q68DU8 428 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 AMZ2Q86W34 360 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 ZNF547Q8IVP9 402 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 BEND7Q8N7W2 519 aaPredicted RBP15.18■□□□□ 0.02
DDB1-216ENST00000539739 NAT14Q8WUY8 206 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 SLC44A1Q8WWI5 657 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 ATXN7L3BQ96GX2 97 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 LINC00615Q96LM1 132 aaPredicted RBP15.18■□□□□ 0.02
DDB1-216ENST00000539739 PAFAH2Q99487 392 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 RBBP8Q99708 897 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 TIMM29Q9BSF4 260 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 CCM2Q9BSQ5 444 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 AARSD1Q9BTE6 412 aaKnown RBP15.18■□□□□ 0.02
DDB1-216ENST00000539739 GAREM1Q9H706 876 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 PPCSQ9HAB8 311 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 FSCN3Q9NQT6 498 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 KLF15Q9UIH9 416 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 BPTFQ12830 3046 aa15.18■□□□□ 0.02
DDB1-216ENST00000539739 C17orf113A0A1B0GUU1 675 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 NUDT17P0C025 328 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
DDB1-216ENST00000539739 SERPINB9P50453 376 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 ILF3Q12906 894 aaKnown RBP eCLIP15.17■□□□□ 0.02
DDB1-216ENST00000539739 PRRT3Q5FWE3 981 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 CTSL3PQ5NE16 218 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 FAM45BPQ6NSW5 357 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 TAOK1Q7L7X3 1001 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 FSTL5Q8N475 847 aaPredicted RBP15.17■□□□□ 0.02
DDB1-216ENST00000539739 FAM45AQ8TCE6 357 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 GTPBP2Q9BX10 602 aaKnown RBP15.17■□□□□ 0.02
DDB1-216ENST00000539739 TMEM168Q9H0V1 697 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 SLC24A2Q9UI40 661 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 ADAM21Q9UKJ8 722 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 VPS13AQ96RL7 3174 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 DMDP11532 3685 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 MGAT4DA6NG13 374 aa15.17■□□□□ 0.02
DDB1-216ENST00000539739 SCAMP1O15126 338 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms