RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ZNHIT2Q9UHR6 403 aa10.1□□□□□ -0.79
CLPB-210ENST00000539148 PILRBQ9UKJ0 227 aa10.1□□□□□ -0.79
CLPB-210ENST00000539148 SLC17A4Q9Y2C5 497 aa10.1□□□□□ -0.79
CLPB-210ENST00000539148 OR1A2Q9Y585 309 aa10.1□□□□□ -0.79
CLPB-210ENST00000539148 GON4LQ3T8J9 2241 aa10.1□□□□□ -0.79
CLPB-210ENST00000539148 PABPN1LA6NDY0 278 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 NEMP2A6NFY4 417 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 OR51F1A6NGY5 319 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 K7ESM1 405 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 EIF3FO00303 357 aaPredicted RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 RAD51BO15315 384 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 GRID2O43424 1007 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 KDM1AO60341 852 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 SOD1P00441 154 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 AHSGP02765 367 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 STMN1P16949 149 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CHRM3P20309 590 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 ITPKAP23677 461 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CRABP2P29373 138 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CCT5P48643 541 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 PRLHRP49683 370 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 KPNA2P52292 529 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 CLDN2P57739 230 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 SRP54P61011 504 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 HNRNPKP61978 463 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLPB-210ENST00000539148 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 ELOCQ15369 112 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 BCL7AQ4VC05 210 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 SYTL3Q4VX76 610 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 RFLNAQ6ZTI6 216 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 OTOAQ7RTW8 1153 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 ADGRG6Q86SQ4 1221 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 LCA5Q86VQ0 697 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 AMZ2Q86W34 360 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 ZC3HC1Q86WB0 502 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 DENND6AQ8IWF6 608 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 PIANPQ8IYJ0 282 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 FSTL5Q8N475 847 aaPredicted RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 GPATCH11Q8N954 259 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 AVL9Q8NBF6 648 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CCDC197Q8NCU1 140 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 UHMK1Q8TAS1 419 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 ASZ1Q8WWH4 475 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 LPGAT1Q92604 370 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 ATOH1Q92858 354 aaPredicted RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 BMFQ96LC9 184 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 SLC6A18Q96N87 628 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 AGAP2Q99490 1192 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 TRIM56Q9BRZ2 755 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CCM2Q9BSQ5 444 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 OR2AG1Q9H205 316 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 FAM96AQ9H5X1 160 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 ACTR5Q9H9F9 607 aaPredicted RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 FBXO6Q9NRD1 293 aaPredicted RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 SPATS2LQ9NUQ6 558 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 TRNAU1APQ9NX07 287 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 TRMT6Q9UJA5 497 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 TLK1Q9UKI8 766 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 SLC6A14Q9UN76 642 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 CRYL1Q9Y2S2 319 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 DGKBQ9Y6T7 804 aa10.09□□□□□ -0.79
CLPB-210ENST00000539148 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
CLPB-210ENST00000539148 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CCDC189A1A4V9 331 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 PRSS38A1L453 326 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 MGAT4DA6NG13 374 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 LIN7AO14910 233 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 CHUKO15111 745 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 LRP3O75074 770 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 HAUS5O94927 633 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 EPN2O95208 641 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CER1O95813 267 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 MT-ND3P03897 115 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 RPN2P04844 631 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CFIP05156 583 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 RETP07949 1114 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ITGA2BP08514 1039 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CBSLP0DN79 551 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ENO3P13929 434 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 IDSP22304 550 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 DGKAP23743 735 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 MAOBP27338 520 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 TYK2P29597 1187 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 FMO4P31512 558 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 CBSP35520 551 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 SLC26A3P40879 764 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 SERPINB8P50452 374 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 ATXN3P54252 364 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 RPA4Q13156 261 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 USP10Q14694 798 aaKnown RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 INSCQ1MX18 579 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 INAVAQ3KP66 663 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
CLPB-210ENST00000539148 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
CLPB-210ENST00000539148 DOK6Q6PKX4 331 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms