RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 IDH2P48735 452 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 CCNHP51946 323 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 OC90Q02509 493 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 LPAL2Q16609 132 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PITRM1Q5JRX3 1037 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MLIPQ5VWP3 458 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NCBP2-AS2Q69YL0 99 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 C22orf39Q6P5X5 142 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NEK10Q6ZWH5 1172 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 LRRTM4Q86VH4 590 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CRYBG2Q8N1P7 616 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 HBEGFQ99075 208 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NPAS2Q99743 824 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KCNN2Q9H2S1 579 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CD248Q9HCU0 757 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 GEMIN8Q9NWZ8 242 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 TOR4AQ9NXH8 423 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 A0A0J9YVX5 310 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CCDC162PA2VCL2 907 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KDELR3O43731 214 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 FKBP6O75344 327 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 IL6P05231 212 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PRG2P13727 222 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 BMP7P18075 431 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PRKCHP24723 683 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PBX1P40424 430 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SLC1A2P43004 574 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PTGER3P43115 390 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MAPK10P53779 464 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 DRG2P55039 364 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 C1QTNF8P60827 252 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ENPEPQ07075 957 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SULT1C3Q6IMI6 304 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CDC73Q6P1J9 531 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CACTIN-AS1Q8N1I8 211 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 TMEM145Q8NBT3 493 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 RNASE11Q8TAA1 199 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 CKAP2Q8WWK9 683 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PYDC1Q8WXC3 89 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ZMAT2Q96NC0 199 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 KCNS3Q9BQ31 491 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 MCOLN1Q9GZU1 580 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SLC24A3Q9HC58 644 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PCDHGB3Q9Y5G1 929 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 STON1Q9Y6Q2 735 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 BIRC5O15392 142 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 TYRP1P17643 537 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 EN2P19622 333 aaPredicted RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 TNFRSF8P28908 595 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CCNFP41002 786 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 BNC1Q01954 994 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRP6-203ENST00000538239 HYAL2Q12891 473 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 ACAP2Q15057 778 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 DPYSL2Q16555 572 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NRF1Q16656 503 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 TRMT5Q32P41 509 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 LRRC66Q68CR7 880 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CPNE8Q86YQ8 564 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 LIX1Q8N485 282 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 SRFBP1Q8NEF9 429 aaKnown RBP5.3□□□□□ -1.56
LRP6-203ENST00000538239 OR4E2Q8NGC2 313 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 CCM2Q9BSQ5 444 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 GPR174Q9BXC1 333 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PCBD2Q9H0N5 130 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 PNPLA8Q9NP80 782 aa5.3□□□□□ -1.56
LRP6-203ENST00000538239 NUP98P52948 1817 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 NEMP2A6NFY4 417 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 H3BQ06 376 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 TGM5O43548 720 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZNF37AP17032 561 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 ITGA2P17301 1181 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CCNA2P20248 432 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 PSME3P61289 254 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 CLCQ05315 142 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 PDK4Q16654 411 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ZIK1Q3SY52 487 aaPredicted RBP5.29□□□□□ -1.56
LRP6-203ENST00000538239 MFSD5Q6N075 450 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 BRAT1Q6PJG6 821 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ARHGAP36Q6ZRI8 547 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ADGRG6Q86SQ4 1221 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 OR8H2Q8N162 312 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 RASGEF1CQ8N431 466 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 FAXDC2Q96IV6 333 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 ADAM7Q9H2U9 754 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SERHL2Q9H4I8 314 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SPAG4Q9NPE6 437 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SERHLQ9NQF3 203 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 SPHK2Q9NRA0 654 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 EFR3BQ9Y2G0 817 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 A0A0D9SEW6 157 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 C2orf71A6NGG8 1288 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TEX28O15482 410 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 JMJD7P0C870 316 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TCF4P15884 667 aa5.29□□□□□ -1.56
LRP6-203ENST00000538239 TM4SF4P48230 202 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms