RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EVA1BQ9NVM1 165 aa8.25□□□□□ -1.09
SPARC-208ENST00000538026 MARCH4Q9P2E8 410 aaPredicted RBP8.25□□□□□ -1.09
SPARC-208ENST00000538026 SNX12Q9UMY4 172 aa8.25□□□□□ -1.09
SPARC-208ENST00000538026 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
SPARC-208ENST00000538026 PCDHGA8Q9Y5G5 932 aa8.25□□□□□ -1.09
SPARC-208ENST00000538026 AK5Q9Y6K8 562 aa8.25□□□□□ -1.09
SPARC-208ENST00000538026 RELNP78509 3460 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 CCDC187A0A096LP49 1063 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 ERI2A8K979 691 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 C9orf172C9J069 976 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 OR1I1O60431 355 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 AVILO75366 819 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 TMEM63AO94886 807 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 CPNE6O95741 557 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 THRAP10827 490 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 ADRA1DP25100 572 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 ACRV1P26436 265 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 NMBRP28336 390 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 PTGIRP43119 386 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 LIMK2P53671 638 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 INHBCP55103 352 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 PPP1CAP62136 330 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 HHEXQ03014 270 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 CDH17Q12864 832 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 SEPT6Q14141 434 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 RPE65Q16518 533 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 INSCQ1MX18 579 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 BCL7AQ4VC05 210 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 TSTD2Q5T7W7 516 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 CAPRIN2Q6IMN6 1127 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 DUS1LQ6P1R4 473 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 CES3Q6UWW8 571 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 TMEM26Q6ZUK4 368 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 RAB11FIP2Q7L804 512 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 LDB1Q86U70 411 aaPredicted RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 AMZ2Q86W34 360 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 CREG2Q8IUH2 290 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 MPP5Q8N3R9 675 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 CCDC89Q8N998 374 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 GDAP1Q8TB36 358 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 HNRNPLLQ8WVV9 542 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 JPH3Q8WXH2 748 aaPredicted RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 CPT1BQ92523 772 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 FGF11Q92914 225 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 MAGOHBQ96A72 148 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 GRAMD1AQ96CP6 724 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 RMDN2Q96LZ7 410 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 OSGEPL1Q9H4B0 414 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 SLC40A1Q9NP59 571 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 EIF2B3Q9NR50 452 aaKnown RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 TREX1Q9NSU2 369 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 RIMKLBQ9ULI2 386 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 PSMD13Q9UNM6 376 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 TCAF1Q9Y4C2 921 aa8.24□□□□□ -1.09
SPARC-208ENST00000538026 DNMT3AQ9Y6K1 912 aaPredicted RBP8.24□□□□□ -1.09
SPARC-208ENST00000538026 ANKRD12Q6UB98 2062 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 KIR2DS5A0A0G2JLQ3 304 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 A0A0G2JNG1 304 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 MGAT4DA6NG13 374 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 KIR2DS3K7RE56 304 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 PLD2O14939 933 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TP73O15350 636 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 EFSO43281 561 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 ZSCAN12O43309 604 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TNFSF15O95150 251 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 GOT2P00505 430 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 FGF3P11487 239 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 ATP1B2P14415 290 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 TYRP1P17643 537 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TPSB2P20231 275 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 MSH3P20585 1137 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 MSNP26038 577 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 IVDP26440 423 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 MGAT1P26572 445 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 PDHA2P29803 388 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 PBLDP30039 288 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 ACTN2P35609 894 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 HADHAP40939 763 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TNNT3P45378 269 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 PRLHRP49683 370 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 VPS41P49754 854 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TERF1P54274 439 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 GFERP55789 205 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 SESN2P58004 480 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 PDE1BQ01064 536 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 SRSF6Q13247 344 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 GPR18Q14330 331 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 KIR2DS5Q14953 304 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 TPSAB1Q15661 275 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 GPR33Q49SQ1 333 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 ZRANB3Q5FWF4 1079 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 PAPD7Q5XG87 772 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 TMEM71Q6P5X7 295 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 LRRC8BQ6P9F7 803 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 NAPRTQ6XQN6 538 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms