RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 XYLT1Q86Y38 959 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 AFAP1L2Q8N4X5 818 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 SLC7A6Q92536 515 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 UBE2FQ969M7 185 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 ZNF669Q96BR6 464 aaPredicted RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 Q96MT0 163 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 OR2A14Q96R47 310 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 LGMNQ99538 433 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 SLC25A23Q9BV35 468 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 NUAK2Q9H093 628 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 RAVER2Q9HCJ3 691 aaKnown RBP10.58□□□□□ -0.72
RTN3-208ENST00000537981 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 ANAPC2Q9UJX6 822 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 UBR3Q6ZT12 1888 aa10.58□□□□□ -0.72
RTN3-208ENST00000537981 A0A0J9YYE9 177 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 E5RI56 91 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 ENDOD1O94919 500 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 GRIK1P39086 918 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 ATXN1P54253 815 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 NKX3-2P78367 333 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 HOXC5Q00444 222 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 RAPSNQ13702 412 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 LAPTM4AQ15012 233 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 C21orf62-AS1Q17RA5 79 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 HSDL1Q3SXM5 330 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 TAF2Q6P1X5 1199 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 GLCCI1Q86VQ1 547 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 OR8H2Q8N162 312 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 C1orf216Q8TAB5 229 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 USB1Q9BQ65 265 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 C1QTNF6Q9BXI9 259 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 NUP50Q9UKX7 468 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 MTF2Q9Y483 593 aaPredicted RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 MIA3Q5JRA6 1907 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 BRCA1P38398 1863 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 NUPL2O15504 423 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 PDPK1O15530 556 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 CCNE2O96020 404 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 SLC35E2BP0CK96 405 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 CD19P15391 556 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 GPX3P22352 226 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 YWHABP31946 246 aaKnown RBP10.57□□□□□ -0.72
RTN3-208ENST00000537981 OR4D2P58180 307 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 GHRHRQ02643 423 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 TRAF3Q13114 568 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 NKG7Q16617 165 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 LINC00299Q6ZSB3 139 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 NECAB2Q7Z6G3 386 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 B3GNT8Q7Z7M8 397 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 SIAH1Q8IUQ4 282 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 SLC41A1Q8IVJ1 513 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 CEP97Q8IW35 865 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 MFSD6LQ8IWD5 586 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 TP53INP2Q8IXH6 220 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 STON2Q8WXE9 905 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 LOXHD1Q8IVV2 1947 aa10.57□□□□□ -0.72
RTN3-208ENST00000537981 BCLAF3A2AJT9 711 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 C16orf96A6NNT2 1141 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 UBFD1O14562 309 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 KATNA1O75449 491 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CSF2P04141 144 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 EDN1P05305 212 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 ITGB5P18084 799 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 PGAM1P18669 254 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 TPSB2P20231 275 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 GADD45AP24522 165 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CCNCP24863 283 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 GRK3P35626 688 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 CBX5P45973 191 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MVKQ03426 396 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 FAPQ12884 760 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 TPSAB1Q15661 275 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 GALNT5Q7Z7M9 940 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 YIPF7Q8N8F6 280 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 OR52K1Q8NGK4 314 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 IL31RAQ8NI17 732 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 UBASH3BQ8TF42 649 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 ISL2Q96A47 359 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 VPS39Q96JC1 886 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 TEX37Q96LM6 180 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 TRNT1Q96Q11 434 aaKnown RBP10.56□□□□□ -0.72
RTN3-208ENST00000537981 CPNE1Q99829 537 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 MYOCQ99972 504 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 APOL2Q9BQE5 337 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 DPEP3Q9H4B8 488 aa10.56□□□□□ -0.72
RTN3-208ENST00000537981 POMKQ9H5K3 350 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms