RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 HTR3CQ8WXA8 447 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF566Q969W8 418 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 BIRC7Q96CA5 298 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 LRRC58Q96CX6 371 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 OMA1Q96E52 524 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 HSFY1Q96LI6 401 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 MBOAT4Q96T53 435 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 GPR22Q99680 433 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 REXO4Q9GZR2 422 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 OSBPL2Q9H1P3 480 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 A3GALT2U3KPV4 340 aa11.24□□□□□ -0.61
SEMA4D-221ENST00000537934 ZCWPW2A0A1B0GU75 182 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 UBXN8O00124 270 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 NR5A2O00482 541 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 GNRH1P01148 92 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TRAPPC2P0DI81 140 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TRAPPC2BP0DI82 140 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 HNRNPLP14866 589 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CYP2A7P20853 494 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ST13P50502 369 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ACLYP53396 1101 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TRAF3Q13114 568 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 FADDQ13158 208 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 GRM3Q14832 879 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CA9Q16790 459 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CDO1Q16878 200 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 LHX8Q68G74 356 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SCYL2Q6P3W7 929 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 NOTUMQ6P988 496 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 RNF180Q86T96 592 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TMEM135Q86UB9 458 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 STK32CQ86UX6 486 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 NLGN4XQ8N0W4 816 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TMBIM1Q969X1 311 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 RPL10LQ96L21 214 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 GAD1Q99259 594 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 TBCBQ99426 244 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 EML4Q9HC35 981 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ZMAT5Q9UDW3 170 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ANGPT2O15123 496 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CNTN5O94779 1100 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 LRIG2O94898 1065 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ARHGEF15O94989 841 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC35E2BP0CK96 405 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 NCK1P16333 377 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 UGT2B10P36537 528 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 GSK3BP49841 420 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ISL1P61371 349 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SURF1Q15526 300 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ESCO2Q56NI9 601 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 FAM122CQ6P4D5 195 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 LARP4Q71RC2 724 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 SYTL1Q8IYJ3 562 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 CENPLQ8N0S6 344 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 PCSK9Q8NBP7 692 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 C8orf48Q96LL4 319 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 AMBRA1Q9C0C7 1298 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 ALG2Q9H553 416 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 EPS8L2Q9H6S3 715 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 KAT8Q9H7Z6 458 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 POLHQ9Y253 713 aa11.23□□□□□ -0.61
SEMA4D-221ENST00000537934 HMX3A6NHT5 357 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TNNC2P02585 160 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 GLULP15104 373 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 AKAP5P24588 427 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 YBX1P67809 324 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 GPR50Q13585 617 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 USP10Q14694 798 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CLCA4Q14CN2 919 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TBRG1Q3YBR2 411 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TPRG1LQ5T0D9 272 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 NXNL2Q5VZ03 156 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 RBM23Q86U06 439 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ZC3HC1Q86WB0 502 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PJA1Q8NG27 643 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 OMDQ99983 421 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TRIM54Q9BYV2 358 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 XYLT2Q9H1B5 865 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 DCSTAMPQ9H295 470 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms