RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 FBRSL1Q9HCM7 1045 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SRRDQ9UH36 339 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TINAGQ9UJW2 476 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ATXN7L1Q9ULK2 861 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 GABRQQ9UN88 632 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGB3Q9Y5G1 929 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HRH3Q9Y5N1 445 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KCNE2Q9Y6J6 123 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 COL4A6Q14031 1691 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CLRN2A0PK11 232 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CCDC182A6NF36 153 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAM25AB3EWG3 89 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAM25CB3EWG5 89 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAM25GB3EWG6 89 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LAD1O00515 517 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TLR3O15455 904 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 LZTS3O60299 673 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 PLIN3O60664 434 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CST8O60676 142 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PRMT3O60678 531 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 IL1BP01584 269 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CPB1P15086 417 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SSTR4P31391 388 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GRK5P34947 590 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 HSD17B2P37059 387 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RPS9P46781 194 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 CRISP3P54108 245 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FCGRTP55899 365 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 INSM1Q01101 510 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 FAPQ12884 760 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 FGL2Q14314 439 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TYSND1Q2T9J0 566 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GPAT3Q53EU6 434 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 USP39Q53GS9 565 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 AGKQ53H12 422 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TPRG1LQ5T0D9 272 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CES5AQ6NT32 575 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SPOCD1Q6ZMY3 1216 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 KRT25Q7Z3Z0 450 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SLC51AQ86UW1 340 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DHFR2Q86XF0 187 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DENND1CQ8IV53 801 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZC3H3Q8IXZ2 948 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 STPG2Q8N412 459 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PDPRQ8NCN5 879 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 OR10Q1Q8NGQ4 319 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CLHC1Q8NHS4 586 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 CYP2W1Q8TAV3 490 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 DEPDC1BQ8WUY9 529 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NUDT8Q8WV74 236 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TEPSINQ96N21 525 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PARK7Q99497 189 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 NAP1L4Q99733 375 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 OMDQ99983 421 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 NUAK2Q9H093 628 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 EFCAB1Q9HAE3 211 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PAK6Q9NQU5 681 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 FBXO8Q9NRD0 319 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RAB6BQ9NRW1 208 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SYBUQ9NX95 663 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SMPD3Q9NY59 655 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 SUCOQ9UBS9 1254 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 MUTYHQ9UIF7 546 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 YARS2Q9Y2Z4 477 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 TEX264Q9Y6I9 313 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MROH5Q6ZUA9 1318 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TCRBV16S1A1N1A0A5B0 115 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TCRBV3S1A0A5B6 114 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PABPN1LA6NDY0 278 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 CCDC154A6NI56 674 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 AGAP5A6NIR3 686 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SPATA31C2B4DYI2 1134 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PRSS44E7EML9 344 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PDXKO00764 312 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGA12O60330 932 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 LY86O95711 162 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ALBP02768 609 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SERPINE1P05121 402 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 APRTP07741 180 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 BCAT1P54687 386 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 EPHA5P54756 1037 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 YWHAZP63104 245 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF252P-AS1Q0IIN9 211 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 C2orf80Q0P641 193 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MRPL28Q13084 256 aaKnown RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 GPR50Q13585 617 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GALNT3Q14435 633 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ATP6AP1Q15904 470 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 BAK1Q16611 211 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 AANATQ16613 207 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 MTERF2Q49AM1 385 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SETMARQ53H47 684 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 PRSS36Q5K4E3 855 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 NDUFAF5Q5TEU4 345 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 C1orf53Q5VUE5 145 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SLC6A19Q695T7 634 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 REP15Q6BDI9 236 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ACAD10Q6JQN1 1059 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 663.1 ms