RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PLK4O00444 970 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 TPD52L2O43399 206 aaKnown RBP3.96□□□□□ -1.78
VBP1-203ENST00000535916 SRSF10O75494 262 aaKnown RBP3.96□□□□□ -1.78
VBP1-203ENST00000535916 FRG1Q14331 258 aaKnown RBP3.96□□□□□ -1.78
VBP1-203ENST00000535916 Q6ZSR9 355 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 ZNRF4Q8WWF5 429 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 HTRA1Q92743 480 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 SEMA4DQ92854 862 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 GIMAP5Q96F15 307 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 PKP2Q99959 881 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 PPCSQ9HAB8 311 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 SCPEP1Q9HB40 452 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 COQ3Q9NZJ6 369 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 DLGAP2Q9P1A6 1054 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 NAALADL1Q9UQQ1 740 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 RABGAP1Q9Y3P9 1069 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 TMEM184BQ9Y519 407 aaPredicted RBP3.96□□□□□ -1.78
VBP1-203ENST00000535916 CYP46A1Q9Y6A2 500 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 KDM3AQ9Y4C1 1321 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 IGHV4-4A0A075B6R2 117 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 A0A087WW49 117 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 A0A1W2PRG0 241 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 PLPP2O43688 288 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 GPR137BO60478 399 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 PAGE4O60829 102 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 RAF1P04049 648 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 FRMD6-AS1P0C7T7 363 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 HSD3B1P14060 373 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 HRH2P25021 359 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 CEACAM8P31997 349 aaPredicted RBP3.95□□□□□ -1.78
VBP1-203ENST00000535916 THOP1P52888 689 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 SNX16P57768 344 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 SP3Q02447 781 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 MFAP5Q13361 173 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 DOK6Q6PKX4 331 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 CNTROBQ8N137 903 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 ANKRD42Q8N9B4 389 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 AGAP3Q96P47 875 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 PIP5K1AQ99755 562 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 STRA6Q9BX79 667 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 TMEM39BQ9GZU3 492 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
VBP1-203ENST00000535916 CWC15Q9P013 229 aaKnown RBP3.95□□□□□ -1.78
VBP1-203ENST00000535916 ZNF318Q5VUA4 2279 aa3.95□□□□□ -1.78
VBP1-203ENST00000535916 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 A0A1W2PNU3 283 aaPredicted RBP3.94□□□□□ -1.78
VBP1-203ENST00000535916 HOXC11O43248 304 aaPredicted RBP3.94□□□□□ -1.78
VBP1-203ENST00000535916 GCNT3O95395 438 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 CEBPBP17676 345 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 NFKBIAP25963 317 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 EPHA8P29322 1005 aaPredicted RBP3.94□□□□□ -1.78
VBP1-203ENST00000535916 ICAM3P32942 547 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 HARS2P49590 506 aaKnown RBP3.94□□□□□ -1.78
VBP1-203ENST00000535916 MRPS34P82930 218 aaKnown RBP3.94□□□□□ -1.78
VBP1-203ENST00000535916 LRIF1Q5T3J3 769 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 SEPT14Q6ZU15 432 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 ST8SIA4Q92187 359 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 FGFBP2Q9BYJ0 223 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 LAT2Q9GZY6 243 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 MYH16Q9H6N6 1097 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 FBXW11Q9UKB1 542 aa3.94□□□□□ -1.78
VBP1-203ENST00000535916 H3BQ06 376 aaPredicted RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 ZNF197O14709 1029 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 PI15O43692 258 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 AP2A2O94973 939 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 ACADSP16219 412 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 CKMT2P17540 419 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 CBLP22681 906 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 SHC1P29353 583 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 RARSP54136 660 aaKnown RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 ZBED6P86452 979 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 CEBPZQ03701 1054 aaKnown RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 DPCR1Q3MIW9 517 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 KRTAP13-3Q3SY46 172 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 BSPRYQ5W0U4 402 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 TRIM65Q6PJ69 517 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 FASTKD5Q7L8L6 764 aaKnown RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 SLC16A9Q7RTY1 509 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 GFI1Q99684 422 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 SEMA6AQ9H2E6 1030 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 FAM120CQ9NX05 1096 aaKnown RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 MTMR10Q9NXD2 777 aa3.93□□□□□ -1.78
VBP1-203ENST00000535916 RCC2Q9P258 522 aaKnown RBP3.93□□□□□ -1.78
VBP1-203ENST00000535916 CCDC196A0A1B0GTZ2 297 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 OR2M5A3KFT3 312 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 OR6C76A6NM76 312 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 MAP2K7O14733 419 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 TGFB1I1O43294 461 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 ZNF217O75362 1048 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 PEX14O75381 377 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 TLX1P31314 330 aaPredicted RBP3.92□□□□□ -1.78
VBP1-203ENST00000535916 TAS2R40P59535 323 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 OLR1P78380 273 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 P2RY6Q15077 328 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 CTU2Q2VPK5 515 aaKnown RBP3.92□□□□□ -1.78
VBP1-203ENST00000535916 ZNF774Q6NX45 483 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 INO80CQ6PI98 192 aaPredicted RBP3.92□□□□□ -1.78
VBP1-203ENST00000535916 CRYBG2Q8N1P7 616 aa3.92□□□□□ -1.78
VBP1-203ENST00000535916 ZNF383Q8NA42 475 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms