RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 EBLN1P0CF75 366 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 ZFXP17010 805 aaPredicted RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 PTPN4P29074 926 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 RPS15P62841 145 aaKnown RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 MESDQ14696 234 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 RPE65Q16518 533 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 B4GALNT4Q76KP1 1039 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 AMZ2Q86W34 360 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 KMT5CQ86Y97 462 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 GALNT11Q8NCW6 608 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 ZNF514Q96K75 400 aaPredicted RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 IL26Q9NPH9 171 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 FGF21Q9NSA1 209 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 UBP1Q9NZI7 540 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
CCDC84-208ENST00000534656 DNMT3AQ9Y6K1 912 aaPredicted RBP13.59□□□□□ -0.23
CCDC84-208ENST00000534656 A0A0A6YYK5 440 aaPredicted RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TLCD2A6NGC4 264 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 GNLYP22749 145 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 HNRNPH3P31942 346 aaKnown RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 ARL4DP49703 201 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 CTSCP53634 463 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TPM4P67936 248 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 PDE1BQ01064 536 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 LAMB3Q13751 1172 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 SLC18A3Q16572 532 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 FHL5Q5TD97 284 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 ZDHHC20Q5W0Z9 365 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 CERS6Q6ZMG9 384 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 FAM83HQ6ZRV2 1179 aaPredicted RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 D2HGDHQ8N465 521 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TTC30BQ8N4P2 665 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 RASGEF1AQ8N9B8 481 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 CPT1CQ8TCG5 803 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TEKT5Q96M29 485 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 CD180Q99467 661 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 SLC25A23Q9BV35 468 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 ZCCHC2Q9C0B9 1178 aaKnown RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 MLXIPLQ9NP71 852 aa13.58□□□□□ -0.24
CCDC84-208ENST00000534656 FARSAQ9Y285 508 aaKnown RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 PCDHGA9Q9Y5G4 932 aaKnown RBP13.58□□□□□ -0.24
CCDC84-208ENST00000534656 UBA6A0AVT1 1052 aaPredicted RBP13.57□□□□□ -0.24
CCDC84-208ENST00000534656 OR5K3A6NET4 321 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A9O60656 530 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 CPNE3O75131 537 aaKnown RBP13.57□□□□□ -0.24
CCDC84-208ENST00000534656 AGFG2O95081 481 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 TMEM253P0C7T8 217 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A6P19224 532 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A1P22309 533 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A4P22310 534 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 PTPN3P26045 913 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 SPAM1P38567 509 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 PGDP52209 483 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 TUBB4BP68371 445 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 HSD11B2P80365 405 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 TUBB2AQ13885 445 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 NFE2L1Q14494 772 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 PLCL1Q15111 1095 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 NOMO1Q15155 1222 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 DNTTIP2Q5QJE6 756 aaKnown RBP13.57□□□□□ -0.24
CCDC84-208ENST00000534656 CPZQ66K79 652 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 CAVIN1Q6NZI2 390 aaKnown RBP13.57□□□□□ -0.24
CCDC84-208ENST00000534656 LUZP1Q86V48 1076 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 RFX6Q8HWS3 928 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 DDHD1Q8NEL9 900 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 SLC35G2Q8TBE7 412 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 TUBB2BQ9BVA1 445 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A7Q9HAW7 530 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A10Q9HAW8 530 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 UGT1A8Q9HAW9 530 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 ACSS2Q9NR19 701 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 HRASLS2Q9NWW9 162 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 IL17CQ9P0M4 197 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 FAM153AQ9UHL3 310 aa13.57□□□□□ -0.24
CCDC84-208ENST00000534656 NBPF19A0A087WUL8 3843 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 LRRK2Q5S007 2527 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ARGFXA6NJG6 315 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 OR2AG2A6NM03 316 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 GPR39O43194 453 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 SCRG1O75711 98 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 EPOP01588 193 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 KRT1P04264 644 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 MTHFD1P11586 935 aaKnown RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 CD68P34810 354 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 CA5AP35218 305 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms