RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 DENND2DQ9H6A0 471 aaPredicted RBP2.57□□□□□ -2
ATM-220ENST00000533526 TRPC7Q9HCX4 862 aa2.57□□□□□ -2
ATM-220ENST00000533526 KLHL9Q9P2J3 617 aa2.57□□□□□ -2
ATM-220ENST00000533526 DNAJB4Q9UDY4 337 aa2.57□□□□□ -2
ATM-220ENST00000533526 FBXL17Q9UF56 701 aa2.57□□□□□ -2
ATM-220ENST00000533526 GAB2Q9UQC2 676 aa2.57□□□□□ -2
ATM-220ENST00000533526 JRKLQ9Y4A0 524 aa2.57□□□□□ -2
ATM-220ENST00000533526 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.57□□□□□ -2
ATM-220ENST00000533526 A0A0G2JLW4 131 aa2.56□□□□□ -2
ATM-220ENST00000533526 LRRC72A6NJI9 287 aa2.56□□□□□ -2
ATM-220ENST00000533526 ERVV-2B6SEH9 535 aa2.56□□□□□ -2
ATM-220ENST00000533526 TMEM178BH3BS89 294 aa2.56□□□□□ -2
ATM-220ENST00000533526 TMEM189-UBE2V1I3L0A0 370 aa2.56□□□□□ -2
ATM-220ENST00000533526 AP3D1O14617 1153 aa2.56□□□□□ -2
ATM-220ENST00000533526 NDUFS4O43181 175 aa2.56□□□□□ -2
ATM-220ENST00000533526 PLPP2O43688 288 aa2.56□□□□□ -2
ATM-220ENST00000533526 PTP4A3O75365 173 aa2.56□□□□□ -2
ATM-220ENST00000533526 WDHD1O75717 1129 aaPredicted RBP2.56□□□□□ -2
ATM-220ENST00000533526 TPPPO94811 219 aa2.56□□□□□ -2
ATM-220ENST00000533526 LIPFP07098 398 aa2.56□□□□□ -2
ATM-220ENST00000533526 TUBBP07437 444 aa2.56□□□□□ -2
ATM-220ENST00000533526 FGF5P12034 268 aa2.56□□□□□ -2
ATM-220ENST00000533526 SELLP14151 372 aa2.56□□□□□ -2
ATM-220ENST00000533526 GABRB1P18505 474 aa2.56□□□□□ -2
ATM-220ENST00000533526 CAPN3P20807 821 aa2.56□□□□□ -2
ATM-220ENST00000533526 MAPK4P31152 587 aa2.56□□□□□ -2
ATM-220ENST00000533526 DCTP40126 519 aa2.56□□□□□ -2
ATM-220ENST00000533526 CD81P60033 236 aa2.56□□□□□ -2
ATM-220ENST00000533526 TUBB4BP68371 445 aa2.56□□□□□ -2
ATM-220ENST00000533526 UBE2V1Q13404 147 aa2.56□□□□□ -2
ATM-220ENST00000533526 KCNC3Q14003 757 aa2.56□□□□□ -2
ATM-220ENST00000533526 NDUFAF5Q5TEU4 345 aa2.56□□□□□ -2
ATM-220ENST00000533526 KIAA0930Q6ICG6 404 aaPredicted RBP2.56□□□□□ -2
ATM-220ENST00000533526 CEACAM20Q6UY09 585 aa2.56□□□□□ -2
ATM-220ENST00000533526 FASTKD5Q7L8L6 764 aaKnown RBP2.56□□□□□ -2
ATM-220ENST00000533526 PTOV1Q86YD1 416 aa2.56□□□□□ -2
ATM-220ENST00000533526 CEP97Q8IW35 865 aa2.56□□□□□ -2
ATM-220ENST00000533526 GPALPP1Q8IXQ4 340 aa2.56□□□□□ -2
ATM-220ENST00000533526 STPG4Q8N801 248 aa2.56□□□□□ -2
ATM-220ENST00000533526 OR10V1Q8NGI7 309 aa2.56□□□□□ -2
ATM-220ENST00000533526 TM9SF4Q92544 642 aa2.56□□□□□ -2
ATM-220ENST00000533526 EVI5LQ96CN4 794 aa2.56□□□□□ -2
ATM-220ENST00000533526 OXNAD1Q96HP4 312 aaPredicted RBP2.56□□□□□ -2
ATM-220ENST00000533526 ZNF354BQ96LW1 612 aa2.56□□□□□ -2
ATM-220ENST00000533526 C17orf77Q96MU5 243 aa2.56□□□□□ -2
ATM-220ENST00000533526 F2RL3Q96RI0 385 aa2.56□□□□□ -2
ATM-220ENST00000533526 FTOQ9C0B1 505 aaKnown RBP eCLIP2.56□□□□□ -2
ATM-220ENST00000533526 APOBEC3GQ9HC16 384 aaKnown RBP2.56□□□□□ -2
ATM-220ENST00000533526 AMACRQ9UHK6 382 aa2.56□□□□□ -2
ATM-220ENST00000533526 TSPYL4Q9UJ04 414 aa2.56□□□□□ -2
ATM-220ENST00000533526 PNMA2Q9UL42 364 aa2.56□□□□□ -2
ATM-220ENST00000533526 C5orf60A6NFR6 353 aa2.55□□□□□ -2
ATM-220ENST00000533526 SMIM1B2RUZ4 78 aa2.55□□□□□ -2
ATM-220ENST00000533526 BLOC1S5-TXNDC5H3BN57 136 aa2.55□□□□□ -2
ATM-220ENST00000533526 VILLO15195 856 aa2.55□□□□□ -2
ATM-220ENST00000533526 SH3BP5O60239 455 aa2.55□□□□□ -2
ATM-220ENST00000533526 GPR137BO60478 399 aa2.55□□□□□ -2
ATM-220ENST00000533526 MITFO75030 526 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 TSPAN9O75954 239 aa2.55□□□□□ -2
ATM-220ENST00000533526 AMBPP02760 352 aa2.55□□□□□ -2
ATM-220ENST00000533526 KRT19P08727 400 aa2.55□□□□□ -2
ATM-220ENST00000533526 CRIP2P52943 208 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 EIF5P55010 431 aaKnown RBP2.55□□□□□ -2
ATM-220ENST00000533526 LINC01547P58512 204 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 MBTD1Q05BQ5 628 aa2.55□□□□□ -2
ATM-220ENST00000533526 SPOCK1Q08629 439 aa2.55□□□□□ -2
ATM-220ENST00000533526 MRGPRG-AS1Q2M3A8 158 aa2.55□□□□□ -2
ATM-220ENST00000533526 TECRLQ5HYJ1 363 aa2.55□□□□□ -2
ATM-220ENST00000533526 WDR38Q5JTN6 314 aa2.55□□□□□ -2
ATM-220ENST00000533526 PLEKHS1Q5SXH7 462 aa2.55□□□□□ -2
ATM-220ENST00000533526 CEP85LQ5SZL2 805 aa2.55□□□□□ -2
ATM-220ENST00000533526 TMEM198Q66K66 360 aa2.55□□□□□ -2
ATM-220ENST00000533526 GALNT13Q8IUC8 556 aa2.55□□□□□ -2
ATM-220ENST00000533526 KLHDC8BQ8IXV7 354 aa2.55□□□□□ -2
ATM-220ENST00000533526 SCYL3Q8IZE3 742 aa2.55□□□□□ -2
ATM-220ENST00000533526 RBM15BQ8NDT2 890 aaKnown RBP2.55□□□□□ -2
ATM-220ENST00000533526 SAT2Q96F10 170 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 PRMT6Q96LA8 375 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 BARHL1Q9BZE3 327 aa2.55□□□□□ -2
ATM-220ENST00000533526 SEMA6AQ9H2E6 1030 aa2.55□□□□□ -2
ATM-220ENST00000533526 DNAJC18Q9H819 358 aa2.55□□□□□ -2
ATM-220ENST00000533526 ECHDC1Q9NTX5 307 aa2.55□□□□□ -2
ATM-220ENST00000533526 SLC38A7Q9NVC3 462 aa2.55□□□□□ -2
ATM-220ENST00000533526 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.55□□□□□ -2
ATM-220ENST00000533526 B3GALT5Q9Y2C3 310 aa2.55□□□□□ -2
ATM-220ENST00000533526 MED19A0JLT2 244 aaPredicted RBP2.54□□□□□ -2
ATM-220ENST00000533526 CLIC2O15247 247 aa2.54□□□□□ -2
ATM-220ENST00000533526 EDIL3O43854 480 aa2.54□□□□□ -2
ATM-220ENST00000533526 RSL1D1O76021 490 aaKnown RBP2.54□□□□□ -2
ATM-220ENST00000533526 WISP2O76076 250 aa2.54□□□□□ -2
ATM-220ENST00000533526 NR3C1P04150 777 aa2.54□□□□□ -2
ATM-220ENST00000533526 H1F0P07305 194 aaKnown RBP2.54□□□□□ -2
ATM-220ENST00000533526 NR1D1P20393 614 aa2.54□□□□□ -2
ATM-220ENST00000533526 MSH3P20585 1137 aa2.54□□□□□ -2
ATM-220ENST00000533526 GEMIN4P57678 1058 aaKnown RBP2.54□□□□□ -2
ATM-220ENST00000533526 RPS18P62269 152 aaKnown RBP2.54□□□□□ -2
ATM-220ENST00000533526 PMP22Q01453 160 aa2.54□□□□□ -2
ATM-220ENST00000533526 KRT33BQ14525 404 aa2.54□□□□□ -2
ATM-220ENST00000533526 TMEM30BQ3MIR4 351 aa2.54□□□□□ -2
ATM-220ENST00000533526 RAB41Q5JT25 222 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms