RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 AMZ2Q86W34 360 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 RAVER1Q8IY67 606 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 IQCKQ8N0W5 287 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 Q8NA96 180 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 MAML1Q92585 1016 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 PNPLA2Q96AD5 504 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 EID2BQ96D98 161 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 TRIM11Q96F44 468 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 SLC41A2Q96JW4 573 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 LYSMD1Q96S90 227 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 TIMM29Q9BSF4 260 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 NUP85Q9BW27 656 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 CEP41Q9BYV8 373 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 RAD18Q9NS91 495 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 EPHA6Q9UF33 1036 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 IP6K2Q9UHH9 426 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
NEDD8-206ENST00000531430 COPG1Q9Y678 874 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 MDC1Q14676 2089 aaKnown RBP9.04□□□□□ -0.96
NEDD8-206ENST00000531430 HIVEP3Q5T1R4 2406 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 OR6C74A6NCV1 312 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 GPR89AB7ZAQ6 455 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MYO1FO00160 1098 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MEN1O00255 615 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 CHUKO15111 745 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 LDB2O43679 373 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A9O60656 530 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 CBX6O95503 412 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 LDLRP01130 860 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 GPR89BP0CG08 455 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MYBL1P10243 752 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 BPIP17213 487 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A6P19224 532 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 POLR2CP19387 275 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-206ENST00000531430 LPOP22079 712 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-206ENST00000531430 CDH3P22223 829 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A1P22309 533 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A4P22310 534 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 VAV2P52735 878 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 RRADP55042 308 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ITGA1P56199 1179 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TUBB4BP68371 445 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MYL5Q02045 173 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 AP1B1Q10567 949 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TUBB2AQ13885 445 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 KHDC1Q4VXA5 237 aaKnown RBP9.03□□□□□ -0.96
NEDD8-206ENST00000531430 PLEKHS1Q5SXH7 462 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 C1QL3Q5VWW1 255 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 LYPLAL1Q5VWZ2 237 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 NCBP2-AS2Q69YL0 99 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TMEM220Q6QAJ8 160 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MED25Q71SY5 747 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TMC3Q7Z5M5 1100 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ZNF547Q8IVP9 402 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 SLC38A9Q8NBW4 561 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 GPR150Q8NGU9 434 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TEKT4Q8WW24 435 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 CPT1BQ92523 772 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 MOCOSQ96EN8 888 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ZNF830Q96NB3 372 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-206ENST00000531430 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TUBB2BQ9BVA1 445 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TLR10Q9BXR5 811 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ILKAPQ9H0C8 392 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A7Q9HAW7 530 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A10Q9HAW8 530 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 UGT1A8Q9HAW9 530 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 FANCEQ9HB96 536 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ANAPC7Q9UJX3 599 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 TCFL5Q9UL49 500 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ZNF711Q9Y462 761 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 ABCA12Q86UK0 2595 aa9.03□□□□□ -0.96
NEDD8-206ENST00000531430 SPTBP11277 2137 aa9.02□□□□□ -0.96
NEDD8-206ENST00000531430 SSU72P8A0A1W2PR75 194 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 SLC9B1P1A6NJY1 282 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 OR2AG2A6NM03 316 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 MAP3K7O43318 606 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 ZBTB11O95625 1053 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-206ENST00000531430 POLBP06746 335 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 MMP2P08253 660 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 MX2P20592 715 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 CYP2A7P20853 494 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 ELAVL4P26378 380 aaKnown RBP9.02□□□□□ -0.97
NEDD8-206ENST00000531430 GSDMDP57764 484 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 GBE1Q04446 702 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 PRKAA1Q13131 559 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 ATP1A4Q13733 1029 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 DPYSL3Q14195 570 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 PAFAH1B3Q15102 231 aaKnown RBP9.02□□□□□ -0.97
NEDD8-206ENST00000531430 PPP2R5EQ16537 467 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 PTCHD3Q3KNS1 767 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 ATP13A5Q4VNC0 1218 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 ZRANB3Q5FWF4 1079 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 IZUMO3Q5VZ72 239 aa9.02□□□□□ -0.97
NEDD8-206ENST00000531430 PAPD7Q5XG87 772 aaKnown RBP9.02□□□□□ -0.97
NEDD8-206ENST00000531430 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms