RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 MT-CO3P00414 261 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 HALP42357 657 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 SHC2P98077 582 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 HHEXQ03014 270 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 SEMA3AQ14563 771 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 ANKRD20A4Q4UJ75 823 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 DNAJC21Q5F1R6 531 aaKnown RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 KIAA0930Q6ICG6 404 aaPredicted RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 HIBCHQ6NVY1 386 aaPredicted RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 PACS1Q6VY07 963 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 LDB1Q86U70 411 aaPredicted RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 MARCH9Q86YJ5 346 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 CCNJLQ8IV13 435 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 TRIM48Q8IWZ4 208 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 OR2L2Q8NH16 312 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 KIF18AQ8NI77 898 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 WDR48Q8TAF3 677 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 STAMBPL1Q96FJ0 436 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 SIGLEC10Q96LC7 697 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 TRIM56Q9BRZ2 755 aaKnown RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 SCHIP1Q9P0W5 487 aaPredicted RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 MARCH4Q9P2E8 410 aaPredicted RBP16.24■□□□□ 0.19
SSH3-205ENST00000527821 CLCA2Q9UQC9 943 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 NEUROG3Q9Y4Z2 214 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 RPS6KL1Q9Y6S9 549 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 RP1P56715 2156 aa16.24■□□□□ 0.19
SSH3-205ENST00000527821 SPEGQ15772 3267 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 ASXL3Q9C0F0 2248 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 GOLGA8KD6RF30 607 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 GOLGA8TH3BQL2 631 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 QSOX1O00391 747 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 NDC80O14777 642 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 ZW10O43264 779 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 OR1I1O60431 355 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 AP2A2O94973 939 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 RPLP0P05388 317 aaKnown RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 ARNTP27540 789 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 ALDH4A1P30038 563 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 RPL21P46778 160 aaKnown RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 FASLGP48023 281 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 TTPAP49638 278 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 CCL7P80098 99 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 DHX9Q08211 1270 aaKnown RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 TUBB2AQ13885 445 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 SPIDRQ14159 915 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 BBS9Q3SYG4 887 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 AGAP9Q5VTM2 703 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 MRNIPQ6NTE8 343 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 ABRAXAS1Q6UWZ7 409 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 WASH2PQ6VEQ5 465 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 FAM83HQ6ZRV2 1179 aaPredicted RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 SPRED1Q7Z699 444 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 SDCCAG8Q86SQ7 713 aaPredicted RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 TMEM135Q86UB9 458 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 CFAP206Q8IYR0 622 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 PDIK1LQ8N165 341 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
SSH3-205ENST00000527821 BBOF1Q8ND07 529 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 HM13Q8TCT9 377 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 SLC38A3Q99624 504 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 ERP44Q9BS26 406 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 CCM2Q9BSQ5 444 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 TUBB2BQ9BVA1 445 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 LRRN3Q9H3W5 708 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 WASH6PQ9NQA3 447 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 CPNE7Q9UBL6 633 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 PSMD13Q9UNM6 376 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 UTP11Q9Y3A2 253 aaKnown RBP16.23■□□□□ 0.19
SSH3-205ENST00000527821 PRSS21Q9Y6M0 314 aa16.23■□□□□ 0.19
SSH3-205ENST00000527821 C17orf113A0A1B0GUU1 675 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 F8W8V4 182 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 CASC3O15234 703 aaKnown RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 NDUFS3O75489 264 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 BANF1O75531 89 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 USP1O94782 785 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 FTH1P02794 183 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 POLBP06746 335 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 OR56A5P0C7T3 313 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 BRAFP15056 766 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 GPR3P46089 330 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 PPM1FP49593 454 aaPredicted RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 OR1D5P58170 312 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 TARDBPQ13148 414 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSH3-205ENST00000527821 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 METRNLQ641Q3 311 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 ZNF438Q7Z4V0 828 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 ZNF761Q86XN6 746 aaPredicted RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 AVL9Q8NBF6 648 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 SH3KBP1Q96B97 665 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 CXorf40BQ96DE9 158 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 PWWP2AQ96N64 755 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 DEPDC7Q96QD5 511 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 GFM1Q96RP9 751 aaKnown RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 SARS2Q9NP81 518 aaKnown RBP16.22■□□□□ 0.19
SSH3-205ENST00000527821 IL1RAPL1Q9NZN1 696 aa16.22■□□□□ 0.19
SSH3-205ENST00000527821 ACSL5Q9ULC5 683 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms