RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 EEDO75530 441 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 WISP3O95389 354 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HRH2P25021 359 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 AGTR2P50052 363 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ALDH3A2P51648 485 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 MLLT6P55198 1093 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 MTPNP58546 118 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SPIDRQ14159 915 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 POLD3Q15054 466 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 LRRC26Q2I0M4 334 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 FAM98BQ52LJ0 330 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ZDHHC13Q8IUH4 622 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TSPEARQ8WU66 669 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 LRRC3Q9BY71 257 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SYTL2Q9HCH5 934 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 INIPQ9NRY2 104 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CATSPERZQ9NTU4 200 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TMEM39AQ9NV64 488 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GALPQ9UBC7 116 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 DAPK2Q9UIK4 370 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ERGIC3Q9Y282 383 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ZFC3H1O60293 1989 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CDC7O00311 574 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GSTA4O15217 222 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ABCB7O75027 752 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CNTN5O94779 1100 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CPNE6O95741 557 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HTR1EP28566 365 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HOXC13P31276 330 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 MTHFRP42898 656 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 RXRGP48443 463 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 RAD23AP54725 363 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 RAD51Q06609 339 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GALNT3Q14435 633 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SEMA3AQ14563 771 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 IHHQ14623 411 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 NIPAL1Q6NVV3 410 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CRTC3Q6UUV7 619 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SYVN1Q86TM6 617 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HID1Q8IV36 788 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ABI1Q8IZP0 508 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 OR4L1Q8NH43 312 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 RHEBL1Q8TAI7 183 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 AUTS2Q8WXX7 1259 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SEMA3CQ99985 751 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 NOL6Q9H6R4 1146 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SNX5Q9Y5X3 404 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TSC2P49815 1807 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 DYTNA2CJ06 578 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 BTN3A1O00481 513 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 NOBOXO60393 691 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ECI2O75521 394 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GJB3O75712 270 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SEC14L2O76054 403 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ODC1P11926 461 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CDH1P12830 882 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 HTR7P34969 479 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GPR15P49685 360 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TMED10P49755 219 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 EIF2B2P49770 351 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 PLA2G16P53816 162 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 IST1P53990 364 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TAS1R1Q7RTX1 841 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 GALNT7Q86SF2 657 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 IGFN1Q86VF2 1251 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CDYL2Q8N8U2 506 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 FBXO30Q8TB52 745 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 FIG4Q92562 907 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF599Q96NL3 588 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TOR3AQ9H497 397 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 EVLQ9UI08 416 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-208ENST00000527323 KERAO60938 352 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 PEX11BO96011 259 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 MMP2P08253 660 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SELPP16109 830 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 TIAL1Q01085 375 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 EMX2Q04743 252 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 PPP1R8Q12972 351 aaKnown RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 PRKG2Q13237 762 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 MEP1AQ16819 746 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms