RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GRTP1Q5TC63 336 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 PTRHD1Q6GMV3 140 aaKnown RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 SDR16C5Q8N3Y7 309 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 BEND7Q8N7W2 519 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 OR2L2Q8NH16 312 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 UHMK1Q8TAS1 419 aaKnown RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 GPBAR1Q8TDU6 330 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 NAT14Q8WUY8 206 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 SLC44A1Q8WWI5 657 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 RBBP8Q99708 897 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 CCDC77Q9BR77 488 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 CCM2Q9BSQ5 444 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 AARSD1Q9BTE6 412 aaKnown RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 LRRC61Q9BV99 259 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 TSSK1BQ9BXA7 367 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 CCDC68Q9H2F9 335 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 LATS2Q9NRM7 1088 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 SPASTQ9UBP0 616 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 GPSM3Q9Y4H4 160 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 LAMA1P25391 3075 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 CABIN1Q9Y6J0 2220 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 EXOC1LA0A1B0GW35 172 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 LNP1A1A4G5 178 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 MGAT4DA6NG13 374 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 FOXD2O60548 495 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-205ENST00000526954 PIAS2O75928 621 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 NUDT17P0C025 328 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 ZNF883P0CG24 379 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 CTSEP14091 401 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 CD9P21926 228 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 SPRP35270 261 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-205ENST00000526954 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 CTBSQ01459 385 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 ELOCQ15369 112 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 PRRT3Q5FWE3 981 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 CHST15Q7LFX5 561 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-205ENST00000526954 AMZ2Q86W34 360 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 FSTL5Q8N475 847 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-205ENST00000526954 KCNJ9Q92806 393 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 VPS39Q96JC1 886 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 PANX3Q96QZ0 392 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 DHRS4Q9BTZ2 278 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 PPCSQ9HAB8 311 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 TM7SF3Q9NS93 570 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 GULP1Q9UBP9 304 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 SLC23A2Q9UGH3 650 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 MED16Q9Y2X0 877 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 ST14Q9Y5Y6 855 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 CSNK1G3Q9Y6M4 447 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 FRYLO94915 3013 aa16.25■□□□□ 0.19
CAPN1-205ENST00000526954 IQCF5A8MTL0 148 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 KPNA5O15131 536 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 TCEA3O75764 348 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 ACP5P13686 325 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 H2AFXP16104 143 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 VCLP18206 1134 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 GCAP28676 217 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 EPHA8P29322 1005 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 CCT8P50990 548 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 LIMK2P53671 638 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 ILF3Q12906 894 aaKnown RBP eCLIP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 SF3A2Q15428 464 aaKnown RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 INSCQ1MX18 579 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 RBM20Q5T481 1227 aaKnown RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 KANSL1Q7Z3B3 1105 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 NRROSQ86YC3 692 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 CNPY4Q8N129 248 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 ZNF548Q8NEK5 533 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 GSDMCQ9BYG8 508 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 CAAP1Q9H8G2 361 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 IL21RQ9HBE5 538 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 DNAAF2Q9NVR5 837 aaKnown RBP16.24■□□□□ 0.19
CAPN1-205ENST00000526954 KLHL42Q9P2K6 505 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 RAPGEFL1Q9UHV5 662 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 SLC24A2Q9UI40 661 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 VWA7Q9Y334 891 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 PLEKHM1Q9Y4G2 1056 aa16.24■□□□□ 0.19
CAPN1-205ENST00000526954 ARHGEF17Q96PE2 2063 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-205ENST00000526954 POC1B-GALNT4F8VUJ3 575 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 SCAMP1O15126 338 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 AQP9O43315 295 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 PCDHGA12O60330 932 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 NIPSNAP2O75323 286 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 FAM155BO75949 473 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 TRIM16O95361 564 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 SHBGP04278 402 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 INHBAP08476 426 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 DGKAP23743 735 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 AOAHP28039 575 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 CCR7P32248 378 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 MSH2P43246 934 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 ABCG1P45844 678 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 SERPINB9P50453 376 aa16.23■□□□□ 0.19
CAPN1-205ENST00000526954 ATXN3P54252 364 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-205ENST00000526954 TIAL1Q01085 375 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN1-205ENST00000526954 BNIP3Q12983 259 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms