RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 C5orf60A6NFR6 353 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 CTSVO60911 334 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 SOCS5O75159 536 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 ZNF217O75362 1048 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 TSPAN9O75954 239 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 WISP2O76076 250 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 BAG4O95429 457 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 PRSS1P07477 247 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 HRH2P25021 359 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 DCTP40126 519 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 CAMPP49913 170 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 SPOCK1Q08629 439 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 KIR2DS5Q14953 304 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 FAM133BQ5BKY9 247 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 PIWIL4Q7Z3Z4 852 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 TEX11Q8IYF3 940 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 WDTC1Q8N5D0 677 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 C1orf52Q8N6N3 182 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 RBM15BQ8NDT2 890 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 DUX3Q96PT4 197 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 RSF1Q96T23 1441 aaPredicted RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 GFI1Q99684 422 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 PLK3Q9H4B4 646 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 TFB2MQ9H5Q4 396 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 UPF2Q9HAU5 1272 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 OGFRQ9NZT2 677 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 DBNLQ9UJU6 430 aaKnown RBP4.42□□□□□ -1.7
CD44-223ENST00000526553 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
CD44-223ENST00000526553 A0A1W2PPI3 338 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 CDRT15L2A8MXV6 281 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 B4DLN1 442 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 AP3D1O14617 1153 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 PLPP2O43688 288 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 PLOD3O60568 738 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 SELLP14151 372 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 GABRB1P18505 474 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 NR1D1P20393 614 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 MAPK4P31152 587 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 NR2C2P49116 596 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 CDH8P55286 799 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 LINC01547P58512 204 aaPredicted RBP4.41□□□□□ -1.7
CD44-223ENST00000526553 KIR2DS3Q14952 304 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 CCDC6Q16204 474 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 RILPL1Q5EBL4 403 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 CFAP58Q5T655 872 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 ZNF449Q6P9G9 518 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 PLXDC2Q6UX71 529 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 PACS1Q6VY07 963 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 GALNT5Q7Z7M9 940 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 TMTC2Q8N394 836 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 GSDMBQ8TAX9 411 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 DACH2Q96NX9 599 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 ERRFI1Q9UJM3 462 aaPredicted RBP4.41□□□□□ -1.7
CD44-223ENST00000526553 CMAHPQ9Y471 501 aa4.41□□□□□ -1.7
CD44-223ENST00000526553 INHBAP08476 426 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 PON1P27169 355 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 POU5F1Q01860 360 aaKnown RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 IKQ13123 557 aaPredicted RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 WTAPQ15007 396 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 KIAA0930Q6ICG6 404 aaPredicted RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 SLC35E4Q6ICL7 350 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 ZNF534Q76KX8 674 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 CHST9Q7L1S5 443 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 KRT74Q7RTS7 529 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 LONP2Q86WA8 852 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 ARID3BQ8IVW6 561 aaPredicted RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 ADGRF2Q8IZF7 708 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 GBGT1Q8N5D6 347 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 LSMEM1Q8N8F7 131 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 GRAPLQ8TC17 118 aaPredicted RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 FBXO17Q96EF6 278 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 OXNAD1Q96HP4 312 aaPredicted RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 ZNF354BQ96LW1 612 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 C17orf77Q96MU5 243 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 GAD1Q99259 594 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 ANKEF1Q9NU02 776 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 SEPT11Q9NVA2 429 aaKnown RBP4.4□□□□□ -1.71
CD44-223ENST00000526553 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 TBC1D29Q9UFV1 150 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 NENFQ9UMX5 172 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 GAB2Q9UQC2 676 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 B3GALT5Q9Y2C3 310 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 YIPF1Q9Y548 306 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 PASKQ96RG2 1323 aa4.4□□□□□ -1.71
CD44-223ENST00000526553 H0YIN7 160 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 ZBTB43O43298 467 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 RB1P06400 928 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 CFC1P0CG37 223 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 FGF5P12034 268 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 PSMB10P40306 273 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 GAGE2BQ13066 116 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 MEP1AQ16819 746 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 GAGE2EQ4V326 116 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 MFSD4BQ5TF39 518 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 ZDHHC20Q5W0Z9 365 aa4.39□□□□□ -1.71
CD44-223ENST00000526553 TMEM198Q66K66 360 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms