RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 VPS4AQ9UN37 437 aa10.47□□□□□ -0.73
VPS26B-203ENST00000525918 WDR37Q9Y2I8 494 aa10.47□□□□□ -0.73
VPS26B-203ENST00000525918 SPO11Q9Y5K1 396 aa10.47□□□□□ -0.73
VPS26B-203ENST00000525918 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
VPS26B-203ENST00000525918 A0A0A6YYK5 440 aaPredicted RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PMPCBO75439 489 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 POP7O75817 140 aaKnown RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 DNAJB5O75953 348 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PDGFAP04085 211 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 GYPCP04921 128 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PTPN4P29074 926 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 ARL4DP49703 201 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PPP1CAP62136 330 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 RPS15P62841 145 aaKnown RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 HSD11B2P80365 405 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PDE1BQ01064 536 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 MESDQ14696 234 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 KCNAB1Q14722 419 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 RPE65Q16518 533 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 SLC18A3Q16572 532 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 UGT8Q16880 541 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 FAM182AQ5T1J6 154 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 ZDHHC20Q5W0Z9 365 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 FAM199XQ6PEV8 388 aaPredicted RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 SYVN1Q86TM6 617 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 EFCAB3Q8N7B9 438 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 GALNT11Q8NCW6 608 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 ZNF514Q96K75 400 aaPredicted RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 CD180Q99467 661 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 PACSIN1Q9BY11 444 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 TRIM55Q9BYV6 548 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 ZCCHC2Q9C0B9 1178 aaKnown RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 TRABDQ9H4I3 376 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.73
VPS26B-203ENST00000525918 GLOD4Q9HC38 313 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 IL26Q9NPH9 171 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 FGF21Q9NSA1 209 aa10.46□□□□□ -0.73
VPS26B-203ENST00000525918 MED13Q9UHV7 2174 aa10.46□□□□□ -0.74
VPS26B-203ENST00000525918 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 LOC285095A0A1B0GVY8 99 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 UBA6A0AVT1 1052 aaPredicted RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TLCD2A6NGC4 264 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 EPOP01588 193 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 EBLN1P0CF75 366 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 HNRNPH3P31942 346 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 SPAM1P38567 509 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 ARHGAP25P42331 645 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TNNT3P45378 269 aaPredicted RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 NR2C2P49116 596 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TUBB4BP68371 445 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TUBB2AQ13885 445 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 PLCL1Q15111 1095 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 DNTTIP2Q5QJE6 756 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 LDLRAP1Q5SW96 308 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 CAVIN1Q6NZI2 390 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 NPNTQ6UXI9 565 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 D2HGDHQ8N465 521 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 RASGEF1AQ8N9B8 481 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 GPR150Q8NGU9 434 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 SLC35G2Q8TBE7 412 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 CPT1CQ8TCG5 803 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 ZFPM2Q8WW38 1151 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TEKT5Q96M29 485 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 MAP3K3Q99759 626 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 SLC25A23Q9BV35 468 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 TUBB2BQ9BVA1 445 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 MLXIPLQ9NP71 852 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 HRASLS2Q9NWW9 162 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 UBP1Q9NZI7 540 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 HACD3Q9P035 362 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 PSMD13Q9UNM6 376 aa10.45□□□□□ -0.74
VPS26B-203ENST00000525918 FARSAQ9Y285 508 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 PCDHGA9Q9Y5G4 932 aaKnown RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
VPS26B-203ENST00000525918 ICE1Q9Y2F5 2266 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 SHANK1Q9Y566 2161 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 OR5K3A6NET4 321 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 OR2AG2A6NM03 316 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 UGT1A9O60656 530 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 CPNE3O75131 537 aaKnown RBP10.44□□□□□ -0.74
VPS26B-203ENST00000525918 SCRG1O75711 98 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 AGFG2O95081 481 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 ZBTB11O95625 1053 aaPredicted RBP10.44□□□□□ -0.74
VPS26B-203ENST00000525918 TMEM253P0C7T8 217 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 UGT1A6P19224 532 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 LPOP22079 712 aaPredicted RBP10.44□□□□□ -0.74
VPS26B-203ENST00000525918 UGT1A1P22309 533 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 UGT1A4P22310 534 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 PTPN3P26045 913 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 PGDP52209 483 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 CTSCP53634 463 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 RPS18P62269 152 aaKnown RBP10.44□□□□□ -0.74
VPS26B-203ENST00000525918 XRCC4Q13426 336 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 LAMB3Q13751 1172 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 ITGA9Q13797 1035 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 NFE2L1Q14494 772 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 CHRNA6Q15825 494 aa10.44□□□□□ -0.74
VPS26B-203ENST00000525918 PPP2R5EQ16537 467 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms