RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 GAGE2DQ9UEU5 116 aa2.53□□□□□ -2
CLNS1A-203ENST00000525359 ACAD8Q9UKU7 415 aa2.53□□□□□ -2
CLNS1A-203ENST00000525359 LYVE1Q9Y5Y7 322 aa2.53□□□□□ -2
CLNS1A-203ENST00000525359 CCDC189A1A4V9 331 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 TMEM189-UBE2V1I3L0A0 370 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 J3KRW8 73 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 GPR137BO60478 399 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 MBD4O95243 580 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 GH2P01242 217 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 IGHV4-38-2P0DP08 117 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 LAMP2P13473 410 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 HRH2P25021 359 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 RGS2P41220 211 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 SETQ01105 290 aaPredicted RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 RUNX1T1Q06455 604 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 MFAP5Q13361 173 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 UBE2V1Q13404 147 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 ITGA9Q13797 1035 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 ZC2HC1CQ53FD0 456 aaPredicted RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 GKAP1Q5VSY0 366 aaPredicted RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 ALS2CLQ60I27 953 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 KLHL35Q6PF15 583 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 ZNF790Q6PG37 636 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 C15orf39Q6ZRI6 1047 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 PXKQ7Z7A4 578 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 PPFIBP2Q8ND30 876 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 RBM15BQ8NDT2 890 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 WDR20Q8TBZ3 569 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 SCFD2Q8WU76 684 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 HDAC2Q92769 488 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 ELMOD3Q96FG2 381 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 PGAM5Q96HS1 289 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 DACH2Q96NX9 599 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 LITAFQ99732 161 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 RHNO1Q9BSD3 238 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 TRIM51Q9BSJ1 452 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 SEMA6AQ9H2E6 1030 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 OLFML3Q9NRN5 406 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 TRMT1Q9NXH9 659 aaKnown RBP2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 COQ3Q9NZJ6 369 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 AASSQ9UDR5 926 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 PNMA2Q9UL42 364 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 NENFQ9UMX5 172 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 CMAHPQ9Y471 501 aa2.52□□□□□ -2.01
CLNS1A-203ENST00000525359 MED19A0JLT2 244 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 A6NL46 340 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 B4E171 279 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 SLCO1B7G3V0H7 640 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 J3QR06 171 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 SH2B2O14492 632 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 NDUFS4O43181 175 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ZNF217O75362 1048 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 CSPG5O95196 566 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 TBX18O95935 607 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PATE4P0C8F1 98 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ERVK-10P10266 1014 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 NR1D1P20393 614 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ACADLP28330 430 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 TSPAN7P41732 249 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 CAMPP49913 170 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ARF3P61204 181 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ARF1P84077 181 aaKnown RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 MPP1Q00013 466 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PLA2G7Q13093 441 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 IKQ13123 557 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 KRT33BQ14525 404 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 FCN2Q15485 313 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 TAF13Q15543 124 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 RARS2Q5T160 578 aaKnown RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 HAUS3Q68CZ6 603 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ARHGAP17Q68EM7 881 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ADALQ6DHV7 355 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 JADE1Q6IE81 842 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 KLC3Q6P597 504 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 SH2D5Q6ZV89 423 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 STXBP4Q6ZWJ1 553 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 IKBIPQ70UQ0 350 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ZNF534Q76KX8 674 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ISCA2Q86U28 154 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 APLFQ8IW19 511 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 MCEMP1Q8IX19 187 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ZNF485Q8NCK3 441 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 TMEM143Q96AN5 459 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 MTERF3Q96E29 417 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PERPQ96FX8 193 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 NSL1Q96IY1 281 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 NAP1L4Q99733 375 aaKnown RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PSD2Q9BQI7 771 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PLK3Q9H4B4 646 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 ZHX3Q9H4I2 956 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 SMARCAD1Q9H4L7 1026 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 DNAJC18Q9H819 358 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 EIF2B3Q9NR50 452 aaKnown RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 SETD4Q9NVD3 440 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 C2orf42Q9NWW7 574 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 MIOSQ9NXC5 875 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 PTTG2Q9NZH5 202 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 CORO1CQ9ULV4 474 aaPredicted RBP2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 B3GALT5Q9Y2C3 310 aa2.51□□□□□ -2.01
CLNS1A-203ENST00000525359 LAS1LQ9Y4W2 734 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms