RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 HIPK1Q86Z02 1210 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 CEP97Q8IW35 865 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PDIK1LQ8N165 341 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 NXNL1Q96CM4 212 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 RILPQ96NA2 401 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 HDHD5Q9BXW7 423 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PARD6GQ9BYG4 376 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 ILKAPQ9H0C8 392 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 TTYH1Q9H313 450 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 NECTIN3Q9NQS3 549 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PAK1IP1Q9NWT1 392 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 COL20A1Q9P218 1284 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 ASB4Q9Y574 426 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 FKBP7Q9Y680 259 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 CROCCQ5TZA2 2017 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PIPSLA2A3N6 862 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 MROH6A6NGR9 719 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 BTN3A3O00478 584 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 NOP56O00567 594 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 KHNYNO15037 678 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 GPR37O15354 613 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 STX7O15400 261 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 B4GAT1O43505 415 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 SIGLEC6O43699 453 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PEX10O60683 326 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 SLC22A3O75751 556 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 NOL4O94818 638 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 EOMESO95936 686 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 TRIM49P0CI25 452 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 TRIM49CP0CI26 452 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 HSPD1P10809 573 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 MAT2AP31153 395 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 RYKP34925 604 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PIK3CBP42338 1070 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 KIR3DL2P43630 455 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 AQP5P55064 265 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 MAT1AQ00266 395 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PRKCZQ05513 592 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 POLD3Q15054 466 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 GRK1Q15835 563 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 OCLNQ16625 522 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 AP5B1Q2VPB7 878 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 GPR33Q49SQ1 333 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 CLLU1Q5K131 121 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 XAF1Q6GPH4 301 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PNCKQ6P2M8 343 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 DENND5BQ6ZUT9 1274 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PRSS48Q7RTY5 328 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 ANKS1BQ7Z6G8 1248 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 RAB43Q86YS6 212 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 ARID3BQ8IVW6 561 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 RBFAQ8N0V3 343 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 SLC43A2Q8N370 569 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 BANPQ8N9N5 519 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 BHLHE22Q8NFJ8 381 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 OR7A2PQ8NGA2 310 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 EXOSC8Q96B26 276 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF558Q96NG5 402 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 KCNH6Q9H252 994 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 OR51B6Q9H340 312 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PAK6Q9NQU5 681 aaPredicted RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 SLC23A1Q9UHI7 598 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 KLHL21Q9UJP4 597 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 USP22Q9UPT9 525 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 JAG2Q9Y219 1238 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 DHRS7Q9Y394 339 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
HMGB4-204ENST00000522796 PHRF1Q9P1Y6 1649 aaKnown RBP8.21□□□□□ -1.1
HMGB4-204ENST00000522796 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 KIDINS220Q9ULH0 1771 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TULP4Q9NRJ4 1543 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NCANO14594 1321 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TRBV23-1A0A0A0MS06 115 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 OR6C70A6NIJ9 312 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 E5RI56 91 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 E7ENX8 843 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 HRO43593 1189 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 HCRTR2O43614 444 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 KLRC4O43908 158 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TADA2AO75478 443 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 BCAS2O75934 225 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 GABARAPO95166 117 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PGLSO95336 258 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 OPN1LWP04000 364 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 KLK3P07288 261 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ADORA3P0DMS8 318 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PLS3P13797 630 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 XRCC1P18887 633 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 BGNP21810 368 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NUP62P37198 522 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 GAD2Q05329 585 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 SLC14A1Q13336 389 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF211Q13398 564 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PUM1Q14671 1186 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 STXBP2Q15833 593 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NTRK3Q16288 839 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms