RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SEPHS1P49903 392 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 GPR18Q14330 331 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 NFE2L1Q14494 772 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 SPARCL1Q14515 664 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 PRPSAP1Q14558 356 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 TAF1AQ15573 450 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 AGAP9Q5VTM2 703 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 CEACAM20Q6UY09 585 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 FAM83HQ6ZRV2 1179 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 DET1Q7L5Y6 550 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 BEND7Q8N7W2 519 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 RSC1A1Q92681 617 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 C9orf72Q96LT7 481 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 TEFMQ96QE5 360 aaKnown RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 BAG1Q99933 345 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 SLC40A1Q9NP59 571 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 FBXO8Q9NRD0 319 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 FKBPLQ9UIM3 349 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 AMFRQ9UKV5 643 aa20.32■□□□□ 0.84
SDCBP-209ENST00000522243 PACSIN2Q9UNF0 486 aaPredicted RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 AAR2Q9Y312 384 aaKnown RBP20.32■□□□□ 0.84
SDCBP-209ENST00000522243 PPFIA2O75334 1257 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 STK10O94804 968 aaKnown RBP20.31■□□□□ 0.84
SDCBP-209ENST00000522243 TJP3O95049 919 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 MSH3P20585 1137 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 HALP42357 657 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 TMPRSS15P98073 1019 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 FOXM1Q08050 763 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 FNBP1LQ5T0N5 605 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 PEX26Q7Z412 305 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 GPR150Q8NGU9 434 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 SPATA13Q96N96 652 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 DESI2Q9BSY9 194 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 SPRY4Q9C004 299 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 ASB8Q9H765 288 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 PILRAQ9UKJ1 303 aa20.31■□□□□ 0.84
SDCBP-209ENST00000522243 C2orf81A6NN90 581 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 POLR1CO15160 346 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 KCNJ13O60928 360 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 ZIC2O95409 532 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 DMPKQ09013 629 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 TBR1Q16650 682 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 TIPARPQ7Z3E1 657 aaKnown RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 TMEM139Q8IV31 216 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 NLGN4XQ8N0W4 816 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 NLGN4YQ8NFZ3 816 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 OR13C4Q8NGS5 318 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 SLC12A9Q9BXP2 914 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 SMOXQ9NWM0 555 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 SIDT1Q9NXL6 827 aaKnown RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 FAM8A1Q9UBU6 413 aa20.3■□□□□ 0.84
SDCBP-209ENST00000522243 SMG1Q96Q15 3661 aaKnown RBP20.3■□□□□ 0.84
SDCBP-209ENST00000522243 C5orf60A6NFR6 353 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 B8ZZF3 427 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 KIF1CO43896 1103 aaKnown RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 RASSF9O75901 435 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 SRP72O76094 671 aaKnown RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 STK17BO94768 372 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 FTCDO95954 541 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 ITGB2P05107 769 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 PTMAP06454 111 aaKnown RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 ANKRD34CP0C6C1 535 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 FAM87AP0C7U9 286 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 SH3BP2P78314 561 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 MSLNQ13421 630 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 RPE65Q16518 533 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 LONRF2Q1L5Z9 754 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 IRGCQ6NXR0 463 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 FAM92BQ6ZTR7 304 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 MICALCLQ6ZW33 695 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 UNC5BQ8IZJ1 945 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 SPC24Q8NBT2 197 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 TBL1YQ9BQ87 522 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 FAM96AQ9H5X1 160 aa20.29■□□□□ 0.84
SDCBP-209ENST00000522243 CFAP20Q9Y6A4 193 aaKnown RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 DNMT3AQ9Y6K1 912 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-209ENST00000522243 LOC101059948A0A1B0GTJ6 334 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 CCL22O00626 93 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 CAPZBP47756 277 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 PPP1CAP62136 330 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 XIAPP98170 497 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 NFATC3Q12968 1075 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 CACHD1Q5VU97 1274 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 DENND5AQ6IQ26 1287 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 RBM12BQ8IXT5 1001 aaKnown RBP20.28■□□□□ 0.84
SDCBP-209ENST00000522243 ELMO2Q96JJ3 720 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 IMP3Q9NV31 184 aaKnown RBP20.28■□□□□ 0.84
SDCBP-209ENST00000522243 CRLS1Q9UJA2 301 aa20.28■□□□□ 0.84
SDCBP-209ENST00000522243 DDX3YO15523 660 aaKnown RBP20.27■□□□□ 0.84
SDCBP-209ENST00000522243 CRTAMO95727 393 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 KIF5AQ12840 1032 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 DUS1LQ6P1R4 473 aaKnown RBP20.27■□□□□ 0.84
SDCBP-209ENST00000522243 UBL4BQ8N7F7 174 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 FAM71DQ8N9W8 422 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 OR6C1Q96RD1 312 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 INSM2Q96T92 566 aaPredicted RBP20.27■□□□□ 0.84
SDCBP-209ENST00000522243 ZPBPQ9BS86 351 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 WWP1Q9H0M0 922 aa20.27■□□□□ 0.84
SDCBP-209ENST00000522243 ZNF768Q9H5H4 540 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms