RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PFDN6O15212 129 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CPNE6O95741 557 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ACP5P13686 325 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 TPH1P17752 444 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ARSDP51689 593 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CTSCP53634 463 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CCL7P80098 99 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SPIDRQ14159 915 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PTPRCAPQ14761 206 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 HIBCHQ6NVY1 386 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 SLC30A9Q6PML9 568 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SNIP1Q8TAD8 396 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 SIGLEC10Q96LC7 697 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SERPINB12Q96P63 405 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 MOSPD1Q9UJG1 213 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PCDHGA7Q9Y5G6 932 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PPM1DO15297 605 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 TMEM63AO94886 807 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 GOT2P00505 430 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 JUPP14923 745 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 BRAFP15056 766 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 HALP42357 657 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 DRG2P55039 364 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 DR1Q01658 176 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 INSCQ1MX18 579 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 FASTKD1Q53R41 847 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 FAM182AQ5T1J6 154 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 TMEM71Q6P5X7 295 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 PRR11Q96HE9 360 aaPredicted RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 STRADBQ9C0K7 418 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 SLC40A1Q9NP59 571 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CATSPERZQ9NTU4 200 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 ZNF624Q9P2J8 865 aaPredicted RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 PCDHB1Q9Y5F3 818 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 DMXL1Q9Y485 3027 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 TCRBV7S3A2A0A539 114 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CPED1A4D0V7 1026 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 E7ESA3 106 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 EIF3HO15372 352 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLK4-209ENST00000521621 CSO75390 466 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 RPLP0P05388 317 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 OR56A5P0C7T3 313 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 MTHFD1P11586 935 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 ARNTP27540 789 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CD82P27701 267 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 LIMK2P53671 638 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 INHBCP55103 352 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 HHEXQ03014 270 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CKAP4Q07065 602 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 TARDBPQ13148 414 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLK4-209ENST00000521621 GBX1Q14549 363 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 TMEM26Q6ZUK4 368 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CYS1Q717R9 158 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 MARK2Q7KZI7 788 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 PRUNE1Q86TP1 453 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 JAMLQ86YT9 394 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CNTN4Q8IWV2 1026 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 PIANPQ8IYJ0 282 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 PNPLA1Q8N8W4 532 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 OR10G6Q8NH81 332 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 WDR36Q8NI36 951 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 HDAC10Q969S8 669 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CD180Q99467 661 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 ABCG4Q9H172 646 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 OR52A5Q9H2C5 316 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 TFB2MQ9H5Q4 396 aaKnown RBP9.28□□□□□ -0.92
CLK4-209ENST00000521621 MVB12BQ9H7P6 319 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CAAP1Q9H8G2 361 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 POLR1BQ9H9Y6 1135 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 CHRAC1Q9NRG0 131 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 SYBUQ9NX95 663 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 WHRNQ9P202 907 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 FAM169AQ9Y6X4 670 aa9.28□□□□□ -0.92
CLK4-209ENST00000521621 FRYLO94915 3013 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SLC5A10A0PJK1 596 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 B4E171 279 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 EIF3FO00303 357 aaPredicted RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 MATN2O00339 956 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 CD3EAPO15446 510 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 BUD23O43709 281 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 DUX1O43812 170 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 EML2O95834 649 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 THRAP10827 490 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 MGAT1P26572 445 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 AKT1P31749 480 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 TSPAN7P41732 249 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 CAV1Q03135 178 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SEPT6Q14141 434 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 RPE65Q16518 533 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 WHAMMP3Q1A5X7 153 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 ZRANB3Q5FWF4 1079 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 ZNF648Q5T619 568 aaPredicted RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 ANKRD22Q5VYY1 191 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 STEAP4Q687X5 459 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms