RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 C15orf39Q6ZRI6 1047 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 CLEC17AQ6ZS10 378 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 TRAPPC11Q7Z392 1133 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 METTL23Q86XA0 190 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PTGR2Q8N8N7 351 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 CMASQ8NFW8 434 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF461Q8TAF7 563 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ATP2A3Q93084 1043 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 KTI12Q96EK9 354 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 HPDLQ96IR7 371 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RPGRIP1Q96KN7 1286 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 TRIM2Q9C040 744 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RASSF1Q9NS23 344 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 SLC22A11Q9NSA0 550 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ZDHHC7Q9NXF8 308 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 SIX4Q9UIU6 781 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 CDH22Q9UJ99 828 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 FBXW11Q9UKB1 542 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PTPRJQ12913 1337 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RALGAPA2Q2PPJ7 1873 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 PRRG1O14668 218 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 HUS1O60921 280 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 AKAP3O75969 853 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 CELA2AP08217 269 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 HNRNPA1P09651 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
SDCBP-208ENST00000520228 CHN1P15882 459 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 TGM2P21980 687 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 NR2F2P24468 414 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 MPGP29372 298 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 HOXA9P31269 272 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 PSMC2P35998 433 aaKnown RBP7.17□□□□□ -1.26
SDCBP-208ENST00000520228 CASP4P49662 377 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 AP3M2P53677 418 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 PDCLQ13371 301 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 TRPC3Q13507 836 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 STIM1Q13586 685 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 CAMK4Q16566 473 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 NFIL3Q16649 462 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 EDRF1Q3B7T1 1238 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 KIAA1614Q5VZ46 1190 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 WSCD1Q658N2 575 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 TPGS2Q68CL5 300 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 CENPPQ6IPU0 288 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 RTL10Q7L3V2 364 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 ADSSL1Q8N142 457 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 THEM5Q8N1Q8 247 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 DDB2Q92466 427 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 SMG7Q92540 1137 aaKnown RBP7.17□□□□□ -1.26
SDCBP-208ENST00000520228 GOLGA1Q92805 767 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 TRIM63Q969Q1 353 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF707Q96C28 371 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-208ENST00000520228 TSG101Q99816 390 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 POMKQ9H5K3 350 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 GDAP2Q9NXN4 497 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 MAN1B1Q9UKM7 699 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 BAG5Q9UL15 447 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 SNX9Q9Y5X1 595 aa7.17□□□□□ -1.26
SDCBP-208ENST00000520228 BRWD1Q9NSI6 2320 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 LRRIQ3A6PVS8 624 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 LOC730098B7Z3J9 87 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PSMA7O14818 248 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 IKBKBO14920 756 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 CETN3O15182 167 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 MAPK13O15264 365 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 CCL16O15467 120 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PPFIA2O75334 1257 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ALDOCP09972 364 aaKnown RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 OR4Q2P0C623 313 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 KRT13P13646 458 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 SP100P23497 879 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PPP1R2P41236 205 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PCP4P48539 62 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PPM1FP49593 454 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 VAMP7P51809 220 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 HSF1Q00613 529 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 CFHR1Q03591 330 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 GPR17Q13304 367 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 BIRC3Q13489 604 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF268Q14587 947 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 DAZAP2Q15038 168 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ZCWPW2Q504Y3 356 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 INTS8Q75QN2 995 aaKnown RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 TMEM86AQ8N2M4 240 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PDCL2Q8N4E4 241 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 OR52N4Q8NGI2 321 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ZFPM2Q8WW38 1151 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ARRDC3Q96B67 414 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 EEF2KMTQ96G04 330 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 DHTKD1Q96HY7 919 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PGLYRP2Q96PD5 576 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF347Q96SE7 839 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 CHODLQ9H9P2 273 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 PLEKHA2Q9HB19 425 aa7.16□□□□□ -1.26
SDCBP-208ENST00000520228 WDR6Q9NNW5 1121 aaKnown RBP7.16□□□□□ -1.26
SDCBP-208ENST00000520228 SEC24AO95486 1093 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 EPB41P11171 864 aaKnown RBP7.15□□□□□ -1.26
SDCBP-208ENST00000520228 ST6GAL1P15907 406 aa7.15□□□□□ -1.26
SDCBP-208ENST00000520228 CCNE1P24864 410 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms