RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 K7ESM1 405 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PLRG1O43660 514 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SNX2O60749 519 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 DCTN3O75935 186 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KIAA0754O94854 1291 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SOD1P00441 154 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CHRNGP07510 517 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KITP10721 976 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ACADMP11310 421 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MTHFD2P13995 350 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 IMPDH1P20839 514 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CD72P21854 359 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 AOAHP28039 575 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ARFIP2P53365 341 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 NAA20P61599 178 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HERVK_113P63132 956 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RPS21P63220 83 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 IFT88Q13099 833 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PRKAA1Q13131 559 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GTF2H3Q13889 308 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 BOP1Q14137 746 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 AGERQ15109 404 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PFKFB4Q16877 469 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ARL13AQ5H913 290 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PLEKHS1Q5SXH7 462 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF648Q5T619 568 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KIAA1161Q6NSJ0 714 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KIAA1324Q6UXG2 1013 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ADAMTSL4Q6UY14 1074 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF852Q6ZMS4 543 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 USP30Q70CQ3 517 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FRA10AC1Q70Z53 315 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PELI3Q8N2H9 469 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FBXO39Q8N4B4 442 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RASGEF1AQ8N9B8 481 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 OR14C36Q8NHC7 312 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ASZ1Q8WWH4 475 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ELMO1Q92556 727 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FUBP1Q96AE4 644 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FAM131CQ96AQ9 280 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 L3HYPDHQ96EM0 354 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZNF514Q96K75 400 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SORT1Q99523 831 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TRMOQ9BU70 441 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ERVK-6Q9BXR3 956 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 FAM126AQ9BYI3 521 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 WWP1Q9H0M0 922 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 EPHX3Q9H6B9 360 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 EML4Q9HC35 981 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CD248Q9HCU0 757 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ACSS2Q9NR19 701 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PNPOQ9NVS9 261 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KCNK4Q9NYG8 393 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 NUDT4Q9NZJ9 180 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MBD1Q9UIS9 605 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 IKZF3Q9UKT9 509 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CNOT6Q9ULM6 557 aaKnown RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RAP2CQ9Y3L5 183 aa7.52□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ZFC3H1O60293 1989 aaKnown RBP7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 A0A1W2PQU0 124 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TCRBV21S2A2A0A5A6 115 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PRR23AA6NEV1 266 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CCT8L1PA6NM43 557 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 STX16-NPEPL1H3BU86 382 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 STX16O14662 325 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RAD51BO15315 384 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SGTAO43765 313 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 VEGFDO43915 354 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 KLK8O60259 260 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 NUAK1O60285 661 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RNGTTO60942 597 aaKnown RBP7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ATG13O75143 517 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SUPT7LO94864 414 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CDK14O94921 469 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PCCBP05166 539 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MPC1LP0DKB6 136 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 C7P10643 843 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 MPSTP25325 297 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ARRB2P32121 409 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CCR7P32248 378 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CCR10P46092 362 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PRLHRP49683 370 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 RPL14P50914 215 aaKnown RBP7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HK2P52789 917 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 CTSCP53634 463 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ALDH18A1P54886 795 aaKnown RBP7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 ADPRHP54922 357 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 AQP5P55064 265 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 TFF2Q03403 129 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 PRKCQQ04759 706 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 HSPA14Q0VDF9 509 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SGCGQ13326 291 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 LRRC32Q14392 662 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 GBX1Q14549 363 aa7.51□□□□□ -1.21
SCARNA20.1-201ENST00000516009 SETDB1Q15047 1291 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms