RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PPM1FP49593 454 aaPredicted RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 TTPAP49638 278 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 DRG2P55039 364 aaKnown RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 MRPS25P82663 173 aaKnown RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 SHC2P98077 582 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 DMPKQ09013 629 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 CALCOCO2Q13137 446 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 MRNIPQ6NTE8 343 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 ZNF449Q6P9G9 518 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 PACS1Q6VY07 963 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 SDCCAG8Q86SQ7 713 aaPredicted RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 CCNJLQ8IV13 435 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 OR2L2Q8NH16 312 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 CCDC97Q96F63 343 aaPredicted RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 LINC00615Q96LM1 132 aaPredicted RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 CLCA2Q9UQC9 943 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 SNX24Q9Y343 169 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 UTP11Q9Y3A2 253 aaKnown RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 NEUROG3Q9Y4Z2 214 aa25.51■■□□□ 1.67
DDR1-279ENST00000515529 ZFC3H1O60293 1989 aaKnown RBP25.51■■□□□ 1.67
DDR1-279ENST00000515529 A6NCN8 305 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 RPLP0P05388 317 aaKnown RBP25.5■■□□□ 1.67
DDR1-279ENST00000515529 OR56A5P0C7T3 313 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 HHEXQ03014 270 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 SPIDRQ14159 915 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 NFE2L1Q14494 772 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 BBS9Q3SYG4 887 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 ANKRD20A4Q4UJ75 823 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 AGAP9Q5VTM2 703 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 HIBCHQ6NVY1 386 aaPredicted RBP25.5■■□□□ 1.67
DDR1-279ENST00000515529 CLDN19Q8N6F1 224 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 MNS1Q8NEH6 495 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 SH3KBP1Q96B97 665 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 SLC38A3Q99624 504 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 ERP44Q9BS26 406 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 CCM2Q9BSQ5 444 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 RAB17Q9H0T7 212 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 RABGEF1Q9UJ41 708 aa25.5■■□□□ 1.67
DDR1-279ENST00000515529 NDUFS3O75489 264 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 MT-CO3P00414 261 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 FTH1P02794 183 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 POLBP06746 335 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 GSTM1P09488 218 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 ALDH4A1P30038 563 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 FASLGP48023 281 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 ARL4CP56559 192 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 CLDN6P56747 220 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 GSTM4Q03013 218 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 THOC5Q13769 683 aaKnown RBP25.49■■□□□ 1.67
DDR1-279ENST00000515529 WASH2PQ6VEQ5 465 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 HM13Q8TCT9 377 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 CXorf40BQ96DE9 158 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 SIGLEC10Q96LC7 697 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 DEPDC7Q96QD5 511 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 GFM1Q96RP9 751 aaKnown RBP25.49■■□□□ 1.67
DDR1-279ENST00000515529 TSSK1BQ9BXA7 367 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 DPH5Q9H2P9 285 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 LRRN3Q9H3W5 708 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 SARS2Q9NP81 518 aaKnown RBP25.49■■□□□ 1.67
DDR1-279ENST00000515529 WASH6PQ9NQA3 447 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 CPNE7Q9UBL6 633 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 ACSL5Q9ULC5 683 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 WASF3Q9UPY6 502 aa25.49■■□□□ 1.67
DDR1-279ENST00000515529 NCOR2Q9Y618 2525 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 FAM149AA5PLN7 773 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 SGTAO43765 313 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 TCEA3O75764 348 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 USP1O94782 785 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 VIPP01282 170 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 PGAM1P18669 254 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 GPR3P46089 330 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 RPL21P46778 160 aaKnown RBP25.48■■□□□ 1.67
DDR1-279ENST00000515529 CCL7P80098 99 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 DHX9Q08211 1270 aaKnown RBP25.48■■□□□ 1.67
DDR1-279ENST00000515529 HIF1AQ16665 826 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 ABRAXAS1Q6UWZ7 409 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 RBM44Q6ZP01 1051 aaKnown RBP25.48■■□□□ 1.67
DDR1-279ENST00000515529 SPRED1Q7Z699 444 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 LDB1Q86U70 411 aaPredicted RBP25.48■■□□□ 1.67
DDR1-279ENST00000515529 TMEM135Q86UB9 458 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 CFAP206Q8IYR0 622 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 NAT9Q9BTE0 207 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 ZMYND15Q9H091 742 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 KCNK4Q9NYG8 393 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 MARCH4Q9P2E8 410 aaPredicted RBP25.48■■□□□ 1.67
DDR1-279ENST00000515529 PSMD13Q9UNM6 376 aa25.48■■□□□ 1.67
DDR1-279ENST00000515529 C17orf113A0A1B0GUU1 675 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 PRR19A6NJB7 356 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 GOLGA8KD6RF30 607 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 GOLGA8TH3BQL2 631 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 PPM1DO15297 605 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 OR1I1O60431 355 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 SLC35G4P0C7Q5 338 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 SEMA3AQ14563 771 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 AMZ1Q400G9 498 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 RNF187Q5TA31 235 aaPredicted RBP25.47■■□□□ 1.67
DDR1-279ENST00000515529 METRNLQ641Q3 311 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 C8orf74Q6P047 294 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 FAM83HQ6ZRV2 1179 aaPredicted RBP25.47■■□□□ 1.67
DDR1-279ENST00000515529 ZNF438Q7Z4V0 828 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms