RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CLCN7P51798 805 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 GSTM4Q03013 218 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 EIF2B5Q13144 721 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 LAYNQ6UX15 382 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 PRR23BQ6ZRT6 265 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 C11orf96Q7Z7L8 435 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SYT12Q8IV01 421 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 CEP97Q8IW35 865 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 KRT222Q8N1A0 295 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 BEND7Q8N7W2 519 aaPredicted RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 LKAAEAR1Q8TD35 194 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SKA1Q96BD8 255 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ZBTB9Q96C00 473 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 TSPAN17Q96FV3 270 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SH3GL2Q99962 352 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 CCM2Q9BSQ5 444 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 POPDC3Q9HBV1 291 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 MRPL40Q9NQ50 206 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 SPATS2LQ9NUQ6 558 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 KLHL42Q9P2K6 505 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 GALPQ9UBC7 116 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 KLQ9UEF7 1012 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SUSD2Q9UGT4 822 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 PNMA8BQ9ULN7 279 aaPredicted RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 DHRS7Q9Y394 339 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 R4GN57 208 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ATXN2Q99700 1313 aaKnown RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 KLHL33A6NCF5 533 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 GOLGA6L10A6NI86 522 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TPP1O14773 563 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 OPA1O60313 960 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 RFPL1O75677 317 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 POP7O75817 140 aaKnown RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 TRIM16O95361 564 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 MT-ND3P03897 115 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 STMN1P16949 149 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 KRT15P19012 456 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 SAT1P21673 171 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 AOAHP28039 575 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CRABP2P29373 138 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TYK2P29597 1187 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CCR7P32248 378 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CSNK1EP49674 416 aaKnown RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 SERPINB8P50452 374 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 PGGT1BP53609 377 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 NXPH1P58417 271 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 RAB10P61026 200 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TCF15Q12870 199 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TEAD4Q15561 434 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 ALG11Q2TAA5 492 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CMC1Q7Z7K0 106 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TRABD2AQ86V40 505 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 PARGQ86W56 976 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 SPATS2Q86XZ4 545 aaKnown RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 GALNT13Q8IUC8 556 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 OXR1Q8N573 874 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CD200R1Q8TD46 325 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 PIGKQ92643 395 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 TSACCQ96A04 125 aaPredicted RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 PDXPQ96GD0 296 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 LOXL4Q96JB6 756 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 GPR21Q99679 349 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CYP4F12Q9HCS2 524 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 SNX15Q9NRS6 342 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
PDPN-210ENST00000513143 GULP1Q9UBP9 304 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 MOSPD1Q9UJG1 213 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
PDPN-210ENST00000513143 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 A0A1W2PPM1 405 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 MGAT4DA6NG13 374 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 KPNA5O15131 536 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 KCNJ13O60928 360 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 RASGRP1O95267 797 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 TNFP01375 233 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 ITGB6P18564 788 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 ATP5DP30049 168 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 GNPDA1P46926 289 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 HK3P52790 923 aa12.32□□□□□ -0.44
PDPN-210ENST00000513143 C21orf59P57076 290 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms