RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 KCNMA1Q12791 1236 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 TIMM50Q3ZCQ8 353 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 LDLRAP1Q5SW96 308 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 RAET1LQ5VY80 246 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 TMEM17Q86X19 198 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.84□□□□□ -0.99
VCAN-208ENST00000512590 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CMKLR1Q99788 373 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SEMA3CQ99985 751 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 HERPUD2Q9BSE4 406 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ABHD10Q9NUJ1 306 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CALML5Q9NZT1 146 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 AMACRQ9UHK6 382 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 EVLQ9UI08 416 aaPredicted RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 RARRES3Q9UL19 164 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 A0A1W2PPL8 197 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CPSF4LA6NMK7 179 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 CER1O95813 267 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 FBLP22087 321 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 CELF3Q5SZQ8 465 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 LRIF1Q5T3J3 769 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 TMEM198Q66K66 360 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SULT1C3Q6IMI6 304 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 LAS2Q8IYD9 372 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 FBXO36Q8NEA4 188 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SYT17Q9BSW7 474 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 KIAA1683Q9H0B3 1180 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SEC14L3Q9UDX4 400 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CROTQ9UKG9 612 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ERGIC3Q9Y282 383 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PCDHB14Q9Y5E9 798 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CNTNAP4Q9C0A0 1308 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 UNC13AQ9UPW8 1703 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ANXA2P2A6NMY6 339 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 EIF1AYO14602 144 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 PIP5K1CO60331 668 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 POP4O95707 220 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 CHRNA1P02708 482 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ANXA2P07355 339 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 GP1BBP13224 206 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 LGALS4P56470 323 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CYP4F3Q08477 520 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 MAPKAPK3Q16644 382 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 TMEM214Q6NUQ4 689 aaKnown RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 GSTCDQ8NEC7 633 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 OR8S1Q8NH09 359 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 SCLYQ96I15 445 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PPP3R2Q96LZ3 170 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 GAL3ST1Q99999 423 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 NAA11Q9BSU3 229 aaPredicted RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 MMADHCQ9H3L0 296 aaPredicted RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 ZNF226Q9NYT6 803 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ING4Q9UNL4 249 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CDC42BPGQ6DT37 1551 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PNMA8CA0A1B0GUJ8 204 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ILVBLA1L0T0 632 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 EPHB6O15197 1021 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 RECQL5O94762 991 aaPredicted RBP8.84□□□□□ -0.99
VCAN-208ENST00000512590 STK17BO94768 372 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 COX4I1P13073 169 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PGAM1P18669 254 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CD247P20963 164 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CDH11P55287 796 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 HERV-K104P61576 105 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 ENPP2Q13822 863 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PCBP1Q15365 356 aaKnown RBP eCLIP8.84□□□□□ -0.99
VCAN-208ENST00000512590 EIPR1Q53HC9 387 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 CFAP52Q8N1V2 620 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 WDR24Q96S15 920 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 B3GNT4Q9C0J1 378 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 NANSQ9NR45 359 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PCDHA3Q9Y5H8 950 aa8.84□□□□□ -0.99
VCAN-208ENST00000512590 PNPLA6Q8IY17 1366 aa8.83□□□□□ -1
VCAN-208ENST00000512590 GMNCA6NCL1 334 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 CLDN11O75508 207 aa8.83□□□□□ -1
VCAN-208ENST00000512590 HCKP08631 526 aa8.83□□□□□ -1
VCAN-208ENST00000512590 CDC25BP30305 580 aa8.83□□□□□ -1
VCAN-208ENST00000512590 OTUD4Q01804 1114 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 FASTKQ14296 549 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 PFKFB4Q16877 469 aa8.83□□□□□ -1
VCAN-208ENST00000512590 KDM7AQ6ZMT4 941 aa8.83□□□□□ -1
VCAN-208ENST00000512590 MMAAQ8IVH4 418 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 ARID3BQ8IVW6 561 aaPredicted RBP8.83□□□□□ -1
VCAN-208ENST00000512590 MEIOBQ8N635 442 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ZNF398Q8TD17 642 aa8.83□□□□□ -1
VCAN-208ENST00000512590 KAT2AQ92830 837 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RAB39BQ96DA2 213 aa8.83□□□□□ -1
VCAN-208ENST00000512590 COX4I2Q96KJ9 171 aa8.83□□□□□ -1
VCAN-208ENST00000512590 FCRL2Q96LA5 508 aaPredicted RBP8.83□□□□□ -1
VCAN-208ENST00000512590 VAT1Q99536 393 aa8.83□□□□□ -1
VCAN-208ENST00000512590 OR12D3Q9UGF7 316 aa8.83□□□□□ -1
VCAN-208ENST00000512590 KDM6BO15054 1643 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ESYT3A0FGR9 886 aa8.83□□□□□ -1
VCAN-208ENST00000512590 GPR25O00155 361 aa8.83□□□□□ -1
VCAN-208ENST00000512590 PDPK1O15530 556 aa8.83□□□□□ -1
VCAN-208ENST00000512590 B4GALT2O60909 372 aa8.83□□□□□ -1
VCAN-208ENST00000512590 LSM8O95777 96 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 ERCC2P18074 760 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms