RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SPRP35270 261 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 RGRP47804 291 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 POLE2P56282 527 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 CLDN2P57739 230 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 MAXP61244 160 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SPIDRQ14159 915 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 TMED2Q15363 201 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 INSCQ1MX18 579 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SIRPB2Q5JXA9 342 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 TSTD2Q5T7W7 516 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 TEDDM1Q5T9Z0 273 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 ZCCHC8Q6NZY4 707 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 PACS1Q6VY07 963 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 RAB11FIP2Q7L804 512 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 B3GNT8Q7Z7M8 397 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SRLQ86TD4 932 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 KCNMB4Q86W47 210 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 RAVER1Q8IY67 606 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 APCDD1Q8J025 514 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 BANPQ8N9N5 519 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 GPR150Q8NGU9 434 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 HCAR2Q8TDS4 363 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 STYXQ8WUJ0 223 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 JPH3Q8WXH2 748 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 MFSD3Q96ES6 412 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 IFT43Q96FT9 208 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 RPL10LQ96L21 214 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SMC6Q96SB8 1091 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 CHRAC1Q9NRG0 131 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 PISDQ9UG56 409 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 CORO1CQ9ULV4 474 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 ACTL7AQ9Y615 435 aa10.39□□□□□ -0.75
PDLIM5-217ENST00000512274 EDDM13A0A1B0GTR0 161 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 HMX2A2RU54 273 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 EME2A4GXA9 379 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 SMIM23A6NLE4 172 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 PLRG1O43660 514 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF821O75541 412 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ASMTLO95671 621 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 CRTAMO95727 393 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 IGSF6O95976 241 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 SRCP12931 536 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 KRT15P19012 456 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ARNTP27540 789 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 STK19P49842 368 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 LIMK2P53671 638 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 RHOAP61586 193 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 SNRPD1P62314 119 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 CRADDP78560 199 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ITKQ08881 620 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 MTM1Q13496 603 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 OLIG2Q13516 323 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 EFTUD2Q15029 972 aaKnown RBP eCLIP10.38□□□□□ -0.755e-8■□□□□ 11.1
PDLIM5-217ENST00000512274 NR0B2Q15466 257 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 TAF1AQ15573 450 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 FAM182AQ5T1J6 154 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 BORAQ6PGQ7 559 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 LEKR1Q6ZMV7 388 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 CAPN12Q6ZSI9 719 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 DSG4Q86SJ6 1040 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 CTAGE3PQ8IX95 158 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 OR2AP1Q8NGE2 309 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 DTX3LQ8TDB6 740 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 VOPP1Q96AW1 172 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ECHDC3Q96DC8 303 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 ZNF641Q96N77 438 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 RBBP8Q99708 897 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 RHOJQ9H4E5 214 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 MAGEE1Q9HCI5 957 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 PCDHGA7Q9Y5G6 932 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 RELNP78509 3460 aa10.38□□□□□ -0.75
PDLIM5-217ENST00000512274 PRAMEF33A0A0G2JMD5 474 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 TSPAN11A1L157 253 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ANKRD66B4E2M5 251 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 F5H423 210 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 PRAMEF10O60809 474 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 RNGTTO60942 597 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 RFPL1O75677 317 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 PGLSO95336 258 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 MT-ND3P03897 115 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 JMJD7P0C870 316 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 DHRS4L1P0CG22 281 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 ITIH1P19827 911 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 CD9P21926 228 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NMBRP28336 390 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 LSP1P33241 339 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 CRHR1P34998 444 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 NUDT1P36639 197 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 CHRNA4P43681 627 aa10.37□□□□□ -0.75
PDLIM5-217ENST00000512274 UQCRFS1P47985 274 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms