RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GDAP1Q8TB36 358 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 BRSK1Q8TDC3 778 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 RSC1A1Q92681 617 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 RNF31Q96EP0 1072 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 C9orf72Q96LT7 481 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 EPB41L1Q9H4G0 881 aa15.92■□□□□ 0.14
LMNA-222ENST00000508500 LOC101059948A0A1B0GTJ6 334 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 OR2AG2A6NM03 316 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 KIF1CO43896 1103 aaKnown RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 POP7O75817 140 aaKnown RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 ITGB2P05107 769 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 RBP3P10745 1247 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 ATP1A2P50993 1020 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 GEMP55040 296 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 EIF3EP60228 445 aaKnown RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 XIAPP98170 497 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 DMPKQ09013 629 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 NFE2L1Q14494 772 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 LDLRAP1Q5SW96 308 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 DENND5AQ6IQ26 1287 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 TMEM220Q6QAJ8 160 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 PLXDC1Q8IUK5 500 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 KLHDC8BQ8IXV7 354 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 IL22RA1Q8N6P7 574 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 BEND7Q8N7W2 519 aaPredicted RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 AVL9Q8NBF6 648 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 CCDC110Q8TBZ0 833 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 FSD1LQ9BXM9 530 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 LUC7LQ9NQ29 371 aaKnown RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 POT1Q9NUX5 634 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 SMOXQ9NWM0 555 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 TMEM184BQ9Y519 407 aaPredicted RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 HECTD1Q9ULT8 2610 aa15.91■□□□□ 0.14
LMNA-222ENST00000508500 SNRNP200O75643 2136 aaKnown RBP15.91■□□□□ 0.14
LMNA-222ENST00000508500 CCDC66A2RUB6 948 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 PYCARD-AS1I3L0S3 204 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 CAPN5O15484 640 aaPredicted RBP15.9■□□□□ 0.14
LMNA-222ENST00000508500 KCNN4O15554 427 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 SGTAO43765 313 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 DLGAP3O95886 979 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 FAM87AP0C7U9 286 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 ZNF28P17035 718 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 VAV2P52735 878 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 RWDD2BP57060 319 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 PPP1CAP62136 330 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 SH3BP2P78314 561 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 ZDHHC20Q5W0Z9 365 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 CEACAM20Q6UY09 585 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 AMZ2Q86W34 360 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 TRIM48Q8IWZ4 208 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 OR4K2Q8NGD2 314 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 OR13C4Q8NGS5 318 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 ZNF398Q8TD17 642 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 TGM7Q96PF1 710 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 TEFMQ96QE5 360 aaKnown RBP15.9■□□□□ 0.14
LMNA-222ENST00000508500 CLMPQ9H6B4 373 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMNA-222ENST00000508500 FKBPLQ9UIM3 349 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 PSMD13Q9UNM6 376 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 ZKSCAN5Q9Y2L8 839 aa15.9■□□□□ 0.14
LMNA-222ENST00000508500 SPTA1P02549 2419 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 PTPN13Q12923 2485 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 NAV2Q8IVL1 2488 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 MACROD2A1Z1Q3 448 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 AGAP14A8MT82 685 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 STX7O15400 261 aaKnown RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 KCNJ13O60928 360 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 PPFIA2O75334 1257 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 ANXA9O76027 345 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 STK17BO94768 372 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 AMD1P17707 334 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 LPOP22079 712 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 SEPHS1P49903 392 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 NAP1L1P55209 391 aaKnown RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 ITGA9Q13797 1035 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 TAF1AQ15573 450 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 RPE65Q16518 533 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 CCDC181Q5TID7 509 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 ITPRIPL1Q6GPH6 555 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 UNC5BQ8IZJ1 945 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 NLGN4XQ8N0W4 816 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 ZSCAN1Q8NBB4 408 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 NLGN4YQ8NFZ3 816 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 CXorf40BQ96DE9 158 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 SPATA13Q96N96 652 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 TTC25Q96NG3 672 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 STARD5Q9NSY2 213 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 PACSIN2Q9UNF0 486 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 PKP3Q9Y446 797 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 DNMT3AQ9Y6K1 912 aaPredicted RBP15.89■□□□□ 0.13
LMNA-222ENST00000508500 CCDC88CQ9P219 2028 aa15.89■□□□□ 0.13
LMNA-222ENST00000508500 COL12A1Q99715 3063 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 SEC16AO15027 2179 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 POLR1CO15160 346 aaPredicted RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 DDX3YO15523 660 aaKnown RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 PRAMEF1O95521 474 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms