RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FSD1LQ9BXM9 530 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 GPN2Q9H9Y4 310 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A7Q9HAW7 530 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A10Q9HAW8 530 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A8Q9HAW9 530 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.76□□□□□ -0.373e-10■■■■■ 57.5
HMGCS1-205ENST00000508319 TRIM10Q9UDY6 481 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 IL17BQ9UHF5 180 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 HEMK1Q9Y5R4 338 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 NBASA2RRP1 2371 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 OR2AG2A6NM03 316 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 TERTO14746 1132 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 NKX2-8O15522 239 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 PJA2O43164 708 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 POP7O75817 140 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 RASSF9O75901 435 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 PRAMEF1O95521 474 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 AGTP01019 485 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 STAT5AP42229 794 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 POLE2P56282 527 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 PPP1CAP62136 330 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 FOXM1Q08050 763 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 CDC20Q12834 499 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 OLIG2Q13516 323 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 MAP7Q14244 749 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 SPA17Q15506 151 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 ACTL9Q8TC94 416 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 STARD8Q92502 1023 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 TTC25Q96NG3 672 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 CATSPER2Q96P56 530 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 TRIM4Q9C037 500 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 RAB33BQ9H082 229 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 SLC25A18Q9H1K4 315 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 ADNPQ9H2P0 1102 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 TRIT1Q9H3H1 467 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 EPHA6Q9UF33 1036 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 RELNP78509 3460 aa12.75□□□□□ -0.37
HMGCS1-205ENST00000508319 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 SOWAHDA6NJG2 315 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 H7C0C1 242 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 STX7O15400 261 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 SUV39H1O43463 412 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 KCNJ13O60928 360 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 NDUFA10O95299 355 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 FECHP22830 423 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 F8A1P23610 371 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PSMB4P28070 264 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PBLDP30039 288 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PTPN7P35236 360 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 ADRA1AP35348 466 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 CYLC1P35663 651 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 HALP42357 657 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 ATP5OP48047 213 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 GEMP55040 296 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 COPS2P61201 443 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 NFE2L1Q14494 772 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 RPE65Q16518 533 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 ITPRIPL1Q6GPH6 555 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 IRGCQ6NXR0 463 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 RANBP10Q6VN20 620 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 FAM92BQ6ZTR7 304 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 ESX1Q8N693 406 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 BEND7Q8N7W2 519 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 OR6C1Q96RD1 312 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 EFHD1Q9BUP0 239 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 LUC7LQ9NQ29 371 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 SEMA5BQ9P283 1151 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 TUBD1Q9UJT1 453 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 EFR3BQ9Y2G0 817 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 REXO2Q9Y3B8 237 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 PCDHA3Q9Y5H8 950 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 DUSP10Q9Y6W6 482 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 MAST4O15021 2626 aa12.74□□□□□ -0.37
HMGCS1-205ENST00000508319 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ANXA9O76027 345 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 WISP1O95388 367 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 LPOP22079 712 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 CTNNA2P26232 953 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 AKT1P31749 480 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 KCNAB2Q13303 367 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 MSLNQ13421 630 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 IL11RAQ14626 422 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-205ENST00000508319 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms