RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 MAPK10P53779 464 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 SNRPD1P62314 119 aaKnown RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 PDCLQ13371 301 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 GRM3Q14832 879 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 MAP9Q49MG5 647 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 LACTB2Q53H82 288 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 FHL5Q5TD97 284 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 TIGD7Q6NT04 549 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 FRMD7Q6ZUT3 714 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 ESPNLQ6ZVH7 1005 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 SPRED1Q7Z699 444 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 VASH2Q86V25 355 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 ZFAND4Q86XD8 727 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 GRAMD1CQ8IYS0 662 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 RBFAQ8N0V3 343 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 C1orf131Q8NDD1 294 aaKnown RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 HCAR2Q8TDS4 363 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 CXorf40AQ8TE69 158 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 HTR3CQ8WXA8 447 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 CASKIN2Q8WXE0 1202 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 SLC35C1Q96A29 364 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 MIB2Q96AX9 1013 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 PGAP3Q96FM1 320 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 PPP1R13BQ96KQ4 1090 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 PSMB7Q99436 277 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 CLPBQ9H078 707 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 INTS2Q9H0H0 1204 aaKnown RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 MEGF9Q9H1U4 602 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 HECAQ9UBI9 543 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 PLEKHB1Q9UF11 243 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-224ENST00000507215 HPCAL4Q9UM19 191 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 VPS4AQ9UN37 437 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 ATP8A1Q9Y2Q0 1164 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 HS3ST4Q9Y661 456 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
NR1I3-224ENST00000507215 DOPEY1Q5JWR5 2465 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 IGLV3-10A0A075B6K4 115 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 CFAP69A5D8W1 941 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 B4E171 279 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 E5RJQ4 531 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 SNAP91O60641 907 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 AGFG2O95081 481 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 ADCY5O95622 1261 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 HOXC4P09017 264 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 HGFP14210 728 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 PFKFB1P16118 471 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 ITIH1P19827 911 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 TSPAN7P41732 249 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 FMO5P49326 533 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 RIPPLY3P57055 190 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 SRP54P61011 504 aaKnown RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 C1orf61Q13536 156 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 STIM1Q13586 685 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DRAP1Q14919 205 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 NFATC4Q14934 902 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 NR1D2Q14995 579 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 C14orf28Q4W4Y0 310 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DCAF12Q5T6F0 453 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 FOXR2Q6PJQ5 311 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 C11orf57Q6ZUT1 292 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 PARS2Q7L3T8 475 aaKnown RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 VPS36Q86VN1 386 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DEFB106AQ8N104 65 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 ZNF397Q8NF99 534 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-224ENST00000507215 OR2AP1Q8NGE2 309 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 CFHR4Q92496 578 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 WDR92Q96MX6 357 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 ZDHHC6Q9H6R6 413 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 ARHGEF38Q9NXL2 777 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 KCTD5Q9NXV2 234 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 FOXJ2Q9P0K8 574 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 LRIT1Q9P2V4 623 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DKK3Q9UBP4 350 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 KLQ9UEF7 1012 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 DNAI1Q9UI46 699 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 RCOR1Q9UKL0 485 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 HPSEQ9Y251 543 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 RNF215Q9Y6U7 377 aa6.73□□□□□ -1.33
NR1I3-224ENST00000507215 C2CD3Q4AC94 2353 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 FAM237AA0A1B0GTK4 181 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 MKRN2OSH3BPM6 223 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 K7ERQ8 282 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 CACNB4O00305 520 aaPredicted RBP6.72□□□□□ -1.33
NR1I3-224ENST00000507215 SMAD6O43541 496 aaKnown RBP6.72□□□□□ -1.33
NR1I3-224ENST00000507215 ULK1O75385 1050 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 ZNF821O75541 412 aaPredicted RBP6.72□□□□□ -1.33
NR1I3-224ENST00000507215 DAB1O75553 588 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 PLATP00750 562 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 PRKCGP05129 697 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 XPAP23025 273 aaPredicted RBP6.72□□□□□ -1.33
NR1I3-224ENST00000507215 CSTF2P33240 577 aaKnown RBP eCLIP6.72□□□□□ -1.33
NR1I3-224ENST00000507215 UGT1A3P35503 534 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 STAT1P42224 750 aa6.72□□□□□ -1.33
NR1I3-224ENST00000507215 CXCR3P49682 368 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms