RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 FAM120BQ96EK7 910 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 DPH2Q9BQC3 489 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 RCOR3Q9P2K3 495 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 INSIG1O15503 277 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ATE1O95260 518 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 BCL10O95999 233 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 OCM2P0CE71 109 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 OCMP0CE72 109 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 CORO1AP31146 461 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 PTGER1P34995 402 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 RPS9P46781 194 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 SGSHP51688 502 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 HERVK_113P63132 956 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 PFKPQ01813 784 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 DMC1Q14565 340 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ACAP2Q15057 778 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 AARS2Q5JTZ9 985 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 TXNDC8Q6A555 127 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 NANOGP8Q6NSW7 305 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 NECAB2Q7Z6G3 386 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 DCP1BQ8IZD4 617 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 TMEM86AQ8N2M4 240 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 FIBCD1Q8N539 461 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 SPPL2AQ8TCT8 520 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 BIRC7Q96CA5 298 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 EGLN2Q96KS0 407 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 GPR78Q96P69 363 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 OR52E6Q96RD3 313 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ERVK-6Q9BXR3 956 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 NFKBIZQ9BYH8 718 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 TRIM15Q9C019 465 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 TUBB1Q9H4B7 451 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 NANOGQ9H9S0 305 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ABCB10Q9NRK6 738 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 CLDN7O95471 211 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ESRRBO95718 433 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 ACRP10323 421 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 KCNE1P15382 129 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ZNF26P17031 533 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 TPP2P29144 1249 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 TGFBR1P36897 503 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 CD300CQ08708 224 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 PRKG2Q13237 762 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ZCCHC8Q6NZY4 707 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 ANKS3Q6ZW76 656 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 CACTIN-AS1Q8N1I8 211 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 ARL14EPQ8N8R7 260 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 HMGCLL1Q8TB92 370 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 SELENOMQ8WWX9 145 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 TMBIM1Q969X1 311 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 OTUB1Q96FW1 271 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 ACBD6Q9BR61 282 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 C11orf84Q9BUA3 381 aaPredicted RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 PNPLA3Q9NST1 481 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 DUS2Q9NX74 493 aaKnown RBP9.48□□□□□ -0.89
PHF3-208ENST00000506783 ORC6Q9Y5N6 252 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 RTTNQ86VV8 2226 aa9.48□□□□□ -0.89
PHF3-208ENST00000506783 RGS5O15539 181 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 TPST2O60704 377 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 CAPN15O75808 1086 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 SYN1P17600 705 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 TACR2P21452 398 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 SLC6A2P23975 617 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 ALDH7A1P49419 539 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 EIF2B2P49770 351 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 LBX1P52954 281 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 HNRNPDQ14103 355 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 ALKAL1Q6UXT8 129 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 ITIH5Q86UX2 942 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 DDHD1Q8NEL9 900 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 SLCO4A1Q96BD0 722 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 RPF2Q9H7B2 306 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 TBC1D23Q9NUY8 699 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 DNAAF2Q9NVR5 837 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 DMTF1Q9Y222 760 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 DNMT3AQ9Y6K1 912 aaPredicted RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 A0A087WXM4 84 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 C2orf78A6NCI8 922 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 PSMD3O43242 534 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 H2AFYO75367 372 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 C1QCP02747 245 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 ZNF865P0CJ78 1059 aaPredicted RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 MAP2K4P45985 399 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
PHF3-208ENST00000506783 CDC42EP1Q00587 391 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 EGFLAMQ63HQ2 1017 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 CLEC14AQ86T13 490 aa9.47□□□□□ -0.89
PHF3-208ENST00000506783 ADCK1Q86TW2 530 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms