RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 DSELQ8IZU8 1212 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 RBM15BQ8NDT2 890 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CSNK2A3Q8NEV1 391 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 OR10S1Q8NGN2 331 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CFAP61Q8NHU2 1237 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MPLKIPQ8TAP9 179 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 AFAP1L1Q8TED9 768 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DPF1Q92782 380 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 APBB2Q92870 758 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF830Q96NB3 372 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SMC6Q96SB8 1091 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DDOQ99489 341 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DESI2Q9BSY9 194 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MMTAG2Q9BU76 263 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC25A23Q9BV35 468 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 THUMPD3Q9BV44 507 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 GPR88Q9GZN0 384 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PRSS22Q9GZN4 317 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ISCUQ9H1K1 167 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCNN2Q9H2S1 579 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 ST6GALNAC4Q9H4F1 302 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CATSPERBQ9H7T0 1116 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 CLK4Q9HAZ1 481 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 OLAHQ9NV23 265 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 TAS2R14Q9NYV8 317 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC9A2Q9UBY0 812 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 STK39Q9UEW8 545 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCDHA12Q9UN75 941 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 PCDHGA5Q9Y5G8 931 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 DHX57Q6P158 1386 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRPM3Q9HCF6 1732 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 NRKQ7Z2Y5 1582 aa3.21□□□□□ -1.9
TRAPPC11-205ENST00000506426 MARF1Q9Y4F3 1742 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ARHGEF37A1IGU5 675 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM8BA6NDV4 472 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 PI4K2BG5E9Z4 385 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADAM10O14672 748 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 SPINT2O43291 252 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 HSPA12AO43301 675 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZIC3O60481 467 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 PRAMEF11O60813 436 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 NDUFB8O95169 186 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 VNN2O95498 520 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 C22orf31O95567 290 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 EGFP01133 1207 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CYP1A2P05177 515 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CYP19A1P11511 503 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ARSBP15848 533 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 HOXC8P31273 242 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 HNRNPH1P31943 449 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 STX2P32856 288 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 COMPP49747 757 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CDH13P55290 713 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPP2R2BQ00005 443 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 COL10A1Q03692 680 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 FOXM1Q08050 763 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 SPOCK1Q08629 439 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 MYBPC2Q14324 1141 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRIP6Q15654 476 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 EZH2Q15910 746 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ASIC2Q16515 512 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 HYAL4Q2M3T9 481 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 SUPT20HL1Q3ZLR7 823 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 FAM98BQ52LJ0 330 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPP6R3Q5H9R7 873 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 NSUN5P2Q63ZY6 315 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCTD18Q6PI47 426 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRAT1Q6PIZ9 186 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TPRG1Q6ZUI0 275 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF367Q7RTV3 350 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 RD3Q7Z3Z2 195 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 GLRX5Q86SX6 157 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADIPOR2Q86V24 386 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CEP57Q86XR8 500 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 MFN1Q8IWA4 741 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMCO5AQ8N6Q1 288 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CAMKVQ8NCB2 501 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 GDAP1Q8TB36 358 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADAMTS14Q8WXS8 1223 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 LPAR1Q92633 364 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 SPACA9Q96E40 222 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 LINC00615Q96LM1 132 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 LRFN5Q96NI6 719 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 KXD1Q9BQD3 176 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 FERMT1Q9BQL6 677 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM79Q9BSE2 394 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 HAUS8Q9BT25 410 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPIL3Q9H2H8 161 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 R3HDMLQ9H3Y0 253 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 RAD21L1Q9H4I0 556 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 NOL11Q9H8H0 719 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 ANKZF1Q9H8Y5 726 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 MMP25Q9NPA2 562 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 CNGB3Q9NQW8 809 aa3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 MBNL1Q9NR56 388 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TRMT1Q9NXH9 659 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-205ENST00000506426 TUBA8Q9NY65 449 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms