RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 LUZP4Q9P127 313 aa8.92□□□□□ -0.98
DHFR-202ENST00000504396 AMACRQ9UHK6 382 aa8.92□□□□□ -0.98
DHFR-202ENST00000504396 PADI1Q9ULC6 663 aa8.92□□□□□ -0.98
DHFR-202ENST00000504396 RGSL1A5PLK6 1076 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 ARGFXA6NJG6 315 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 FADS2P1A8MWK0 482 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 GPR89AB7ZAQ6 455 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SEMA7AO75326 666 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SPAG6O75602 509 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 GPR89BP0CG08 455 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 MYBL1P10243 752 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SSR1P43307 286 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 ARL4DP49703 201 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 CCL11P51671 97 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 CLCNKAP51800 687 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 RPL26P61254 145 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 RPS18P62269 152 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 TUBB3Q13509 450 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 ZNF569Q5MCW4 686 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 ZNF648Q5T619 568 aaPredicted RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 CPZQ66K79 652 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 ALG1LQ6GMV1 187 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 TMEM26Q6ZUK4 368 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 POLNQ7Z5Q5 900 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 TEX26Q8N6G2 289 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SEC14L1Q92503 715 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 RSC1A1Q92681 617 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 CXorf40BQ96DE9 158 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 PLEKHG4BQ96PX9 1271 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 LYSMD1Q96S90 227 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SPOCK3Q9BQ16 436 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SYT11Q9BT88 431 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 FAM83DQ9H4H8 585 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 PDE7BQ9NP56 450 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 LHX9Q9NQ69 397 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 TRIM10Q9UDY6 481 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 RARRES3Q9UL19 164 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 G3BP2Q9UN86 482 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 RPL26L1Q9UNX3 145 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
DHFR-202ENST00000504396 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
DHFR-202ENST00000504396 C21orf140B9A014 251 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 MSTNO14793 375 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 KIF1CO43896 1103 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 NUAK1O60285 661 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 SLC25A14O95258 325 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 C9P02748 559 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 FTLP02792 175 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 TCF4P15884 667 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ZNF8P17098 575 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 RPL10P27635 214 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 IL1R2P27930 398 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 GJC1P36383 396 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 CAPZBP47756 277 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 SPINT3P49223 89 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ZNF165P49910 485 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 RPS15P62841 145 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 UBE2IP63279 158 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 PDE1BQ01064 536 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 MYL5Q02045 173 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 SEMA5AQ13591 1074 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ASIC2Q16515 512 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ANKRD20A8PQ5CZ79 823 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 CCDC122Q5T0U0 273 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 TIGD7Q6NT04 549 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 IRF2BP2Q7Z5L9 587 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 APLFQ8IW19 511 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 SIDT2Q8NBJ9 832 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 TEKT4Q8WW24 435 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 FATE1Q969F0 183 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 TRIM44Q96DX7 344 aaPredicted RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 ZDHHC12Q96GR4 267 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 TDRD1Q9BXT4 1180 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 SLC29A3Q9BZD2 475 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 CARD9Q9H257 536 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 PCDH9Q9HC56 1237 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 SLAMF7Q9NQ25 335 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 RBM22Q9NW64 420 aaKnown RBP eCLIP8.9□□□□□ -0.98
DHFR-202ENST00000504396 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ZFATQ9P243 1243 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 CNOT6Q9ULM6 557 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 PCDHGA6Q9Y5G7 932 aa8.9□□□□□ -0.98
DHFR-202ENST00000504396 SPTAN1Q13813 2472 aaKnown RBP8.9□□□□□ -0.98
DHFR-202ENST00000504396 UTP20O75691 2785 aaKnown RBP8.9□□□□□ -0.99
DHFR-202ENST00000504396 TEX15Q9BXT5 2789 aa8.9□□□□□ -0.99
DHFR-202ENST00000504396 USP9XQ93008 2570 aaPredicted RBP8.9□□□□□ -0.99
DHFR-202ENST00000504396 OR52A4PA6NMU1 304 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 MFSD11O43934 449 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 TIAF1O95411 115 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 RNF224P0DH78 156 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 RARAP10276 462 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 FGF5P12034 268 aa8.89□□□□□ -0.99
DHFR-202ENST00000504396 XRCC1P18887 633 aaPredicted RBP8.89□□□□□ -0.99
DHFR-202ENST00000504396 DRG2P55039 364 aaKnown RBP8.89□□□□□ -0.99
DHFR-202ENST00000504396 MRPL49Q13405 166 aaKnown RBP8.89□□□□□ -0.99
DHFR-202ENST00000504396 GALNT3Q14435 633 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms