RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PACRGLQ8N7B6 248 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 OR13J1Q8NGT2 312 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PYCR2Q96C36 320 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ROPN1LQ96C74 230 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ITPKCQ96DU7 683 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 C12orf42Q96LP6 360 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HOXD1Q9GZZ0 328 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 DSN1Q9H410 356 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ASB7Q9H672 318 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GPN2Q9H9Y4 310 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PAQR5Q9NXK6 330 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MGAMO43451 1857 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 COL4A5P29400 1685 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TCRBV5S2A0A599 114 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ZSCAN5BA6NJL1 495 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CDC7O00311 574 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 FAM20BO75063 409 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HLA-DQB2P05538 268 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GPIP06744 558 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CNPP09543 421 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MYCLP1P12525 358 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 NAT1P18440 290 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 IMPDH1P20839 514 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GSTM2P28161 218 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CASP9P55211 416 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 WNT3AP56704 352 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MVKQ03426 396 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ENPEPQ07075 957 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 GRSF1Q12849 480 aaKnown RBP eCLIP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 BNIP2Q12982 314 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PTPRRQ15256 657 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 NXNL2Q5VZ03 156 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LAIR1Q6GTX8 287 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LAIR2Q6ISS4 152 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MMAAQ8IVH4 418 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SCN4BQ8IWT1 228 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 NLGN4XQ8N0W4 816 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CADM2Q8N3J6 435 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 C7orf57Q8NEG2 295 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CDC26Q8NHZ8 85 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 LPPQ93052 612 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 Q96MT0 163 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 WDR6Q9NNW5 1121 aaKnown RBP7.54□□□□□ -1.2
NEDD9-208ENST00000504387 HACD3Q9P035 362 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 SARDHQ9UL12 918 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 ASB1Q9Y576 335 aa7.54□□□□□ -1.2
NEDD9-208ENST00000504387 A0A096LPI6 279 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 MAGEB16A2A368 324 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 MOXD2PA6NHM9 499 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 EFCAB9A8MZ26 197 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 H0Y626 953 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 BCKDKO14874 412 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 GPR39O43194 453 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TSC22D2O75157 780 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OR4F21O95013 312 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TRIM16O95361 564 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 C1QCP02747 245 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 MYL3P08590 195 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 RBP1P09455 135 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 FCGR1AP12314 374 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 C21orf33P30042 268 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 KCNC4Q03721 635 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 PTGR1Q14914 329 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 HIST2H2ACQ16777 129 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TRIM60Q495X7 471 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TRAF7Q6Q0C0 670 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 BLOC1S3Q6QNY0 202 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 LILRB4Q8NHJ6 448 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 PROX1Q92786 737 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 NEDD4LQ96PU5 975 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 MBOAT4Q96T53 435 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 CHCHD6Q9BRQ6 235 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 KIFC1Q9BW19 673 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 IRF2BPLQ9H1B7 796 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 DCSTAMPQ9H295 470 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 ACTR8Q9H981 624 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM30AQ9NV96 361 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 RNF112Q9ULX5 631 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 IFT52Q9Y366 437 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 ARL5AQ9Y689 179 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 UNCXA6NJT0 531 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 UPK1AO00322 258 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 SH3BGRLO75368 114 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TOMM70O94826 608 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 GUCA1CO95843 209 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 CHRNA1P02708 482 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 FYNP06241 537 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 CHRNB1P11230 501 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 G6PDP11413 515 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 HSD17B1P14061 328 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 SERPINB10P48595 397 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms