RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 HEXDCQ8WVB3 486 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM136AQ96C01 138 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 MRRFQ96E11 262 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 TXLNGYQ9BZA5 131 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 P2RY12Q9H244 342 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 DNAAF2Q9NVR5 837 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 BTBD3Q9Y2F9 522 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 CABIN1Q9Y6J0 2220 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 TRBV23OR9-2A0A075B6M9 112 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM159BA6NKW6 160 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 PRMT5O14744 637 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 YY2O15391 372 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 DFNA5O60443 496 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM155BO75949 473 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 TRIM16O95361 564 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 EML2O95834 649 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 AHSGP02765 367 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 GSTA2P09210 222 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 CD59P13987 128 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 PPARGP37231 505 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 ACTR1BP42025 376 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 PGGT1BP53609 377 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 ACTR1AP61163 376 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 FRG1Q14331 258 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 NFE2L1Q14494 772 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 BRD3Q15059 726 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 KBTBD12Q3ZCT8 623 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 BCL7AQ4VC05 210 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 PTRHD1Q6GMV3 140 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 CEP128Q6ZU80 1094 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 RELL1Q8IUW5 271 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 EID2Q8N6I1 236 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 TCF12Q99081 682 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 NDNQ99608 321 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 TSPYL1Q9H0U9 437 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 OSGEPL1Q9H4B0 414 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 TRNAU1APQ9NX07 287 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 ZFATQ9P243 1243 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 GALPQ9UBC7 116 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 RABGEF1Q9UJ41 708 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 DOLKQ9UPQ8 538 aa13.05□□□□□ -0.32
PDLIM7-212ENST00000504380 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ACACBO00763 2458 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 GPR89AB7ZAQ6 455 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 TRIM38O00635 465 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 SH3BP5O60239 455 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 NIPSNAP2O75323 286 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ANXA6P08133 673 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 GPR89BP0CG08 455 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 SDHBP21912 280 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 PRLHRP49683 370 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ARHGAP8P85298 464 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ILF3Q12906 894 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ELOCQ15369 112 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 SEPT7Q16181 437 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 RBM20Q5T481 1227 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 XKR5Q6UX68 686 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 AMZ2Q86W34 360 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 CNTN4Q8IWV2 1026 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 CTAGE3PQ8IX95 158 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 CFAP206Q8IYR0 622 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 FSTL5Q8N475 847 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 PPM1NQ8N819 430 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 EIF1ADQ8N9N8 165 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM46DQ8NEK8 389 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 ACVR1CQ8NER5 493 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 CCM2Q9BSQ5 444 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 GSDMCQ9BYG8 508 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 SARS2Q9NP81 518 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 PRDM8Q9NQV8 689 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 INTS10Q9NVR2 710 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 GULP1Q9UBP9 304 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 GPR34Q9UPC5 381 aa13.04□□□□□ -0.32
PDLIM7-212ENST00000504380 BPTFQ12830 3046 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 MGAT4DA6NG13 374 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 B4DGG1 531 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 LMO7DNF2Z398 122 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 YKT6O15498 198 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 RIPK2O43353 540 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 PCDHGA12O60330 932 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 AP2A2O94973 939 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 OR56A5P0C7T3 313 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms