RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 PPP1R16BQ96T49 567 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 RBM4Q9BWF3 364 aaKnown RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 AMBRA1Q9C0C7 1298 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 FAM49AQ9H0Q0 323 aaPredicted RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 NRCAMQ92823 1304 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 LOC100130705A0A1B0GUX0 176 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 A0A1W2PQ67 120 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PABPN1LA6NDY0 278 aaKnown RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 AGAP5A6NIR3 686 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 PSMD3O43242 534 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 LRIG2O94898 1065 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 NPPAP01160 153 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 LTA4HP09960 611 aaKnown RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 CLK3P49761 638 aaKnown RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 P2RX3P56373 397 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 GRIK2Q13002 908 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 FADDQ13158 208 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 CTBP1Q13363 440 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 ACAP2Q15057 778 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PCID2Q5JVF3 399 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 GLYATQ6IB77 296 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PNCKQ6P2M8 343 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PKN3Q6P5Z2 889 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 CCBE1Q6UXH8 406 aaPredicted RBP11.81□□□□□ -0.52
TP53-208ENST00000504290 DENND6AQ8IWF6 608 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 NETO2Q8NC67 525 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 FBLIM1Q8WUP2 373 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PTPN18Q99952 460 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 CLPBQ9H078 707 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 TM9SF3Q9HD45 589 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 CHST12Q9NRB3 414 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 IL37Q9NZH6 218 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 C3orf18Q9UK00 162 aa11.81□□□□□ -0.52
TP53-208ENST00000504290 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 CENPXA8MT69 81 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 PDZK1P1A8MUH7 402 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 EEDO75530 441 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 CNTN5O94779 1100 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 MFN2O95140 757 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 F2P00734 622 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 LBPP18428 481 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 BDNFP23560 247 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 CTHP32929 405 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 MTHFRP42898 656 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 MRPL19P49406 292 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 SEPHS1P49903 392 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 DEFA1P59665 94 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 DEFA3P59666 94 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 NCS1P62166 190 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 MRPS15P82914 257 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 PPP2R2BQ00005 443 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 CHRNB3Q05901 458 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 KCNAB2Q13303 367 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 PLEKHG6Q3KR16 790 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZNF404Q494X3 552 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZNF691Q5VV52 312 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 KIAA1841Q6NSI8 718 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 SLC27A1Q6PCB7 646 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 RBM23Q86U06 439 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.8□□□□□ -0.52
TP53-208ENST00000504290 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 REXO5Q96IC2 774 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 VAT1Q99536 393 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 USB1Q9BQ65 265 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 SLA2Q9H6Q3 261 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 DNAJC15Q9Y5T4 150 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 FAM92AA1XBS5 289 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 CCDC154A6NI56 674 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 HAT1O14929 419 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 DCLK1O15075 740 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 VPS4BO75351 444 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 APOA1P02647 267 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 SPNP16150 400 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 M6PRP20645 277 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ALDH4A1P30038 563 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 UGT2B10P36537 528 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 PIGAP37287 484 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 KCNK10P57789 538 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 MVKQ03426 396 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 EMX2Q04743 252 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 CLCA4Q14CN2 919 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZNF678Q5SXM1 525 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ATAD3CQ5T2N8 411 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 SULT1C3Q6IMI6 304 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZCCHC8Q6NZY4 707 aaKnown RBP11.8□□□□□ -0.52
TP53-208ENST00000504290 C14orf80Q86SX3 495 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 FAM131BQ86XD5 332 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 ZHX1-C8orf76Q96EF9 292 aa11.8□□□□□ -0.52
TP53-208ENST00000504290 DEPDC7Q96QD5 511 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms