RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ATP6V1B1P15313 513 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 TNFRSF1BP20333 461 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 C21orf33P30042 268 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 SSTR2P30874 369 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 MMP13P45452 471 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 RASSF2P50749 326 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 ZNF75DP51815 510 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 NUDT6P53370 316 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 TGFB2P61812 414 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 C17orf67Q0P5P2 114 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 COASYQ13057 564 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 PPIGQ13427 754 aaKnown RBP eCLIP3.59□□□□□ -1.83
CALD1-224ENST00000498254 RABEP1Q15276 862 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 TRIP6Q15654 476 aaKnown RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 DECR1Q16698 335 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 PPP6R3Q5H9R7 873 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 PLA2G4FQ68DD2 849 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 TPRG1Q6ZUI0 275 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 ZNF534Q76KX8 674 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 MEPCEQ7L2J0 689 aaKnown RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 SPATA21Q7Z572 469 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 SPATA19Q7Z5L4 167 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 FAM114A1Q8IWE2 563 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 KLHL7Q8IXQ5 586 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 PM20D2Q8IYS1 436 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 SYCP3Q8IZU3 236 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 NAT8LQ8N9F0 302 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 NEXN-AS1Q8NBZ9 246 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 MOSPD2Q8NHP6 518 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 TAAR8Q969N4 342 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 SNX21Q969T3 373 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 STAMBPL1Q96FJ0 436 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 HES6Q96HZ4 224 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 ZNF582Q96NG8 517 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 SEMA4CQ9C0C4 833 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 DNAI2Q9GZS0 605 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 DPAGT1Q9H3H5 408 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 PIH1D3Q9NQM4 214 aaKnown RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
CALD1-224ENST00000498254 PTGDR2Q9Y5Y4 395 aa3.59□□□□□ -1.83
CALD1-224ENST00000498254 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 LINC01553A4QN01 128 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ANKUB1A6NFN9 424 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ANXA2P2A6NMY6 339 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 INAFM1C9JVW0 142 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 TMEM178BH3BS89 294 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 TNFRSF13BO14836 293 aaPredicted RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 WNT9BO14905 357 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 CLIC2O15247 247 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 KCNN4O15554 427 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 FMO6PO60774 539 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ACSL3O95573 720 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 TGFB3P10600 412 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 UGT1A1P22309 533 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 KCNA5P22460 613 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ATP6V1E1P36543 226 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 KCNJ1P48048 391 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 RAD23BP54727 409 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 NHLH1Q02575 133 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 UBXN1Q04323 297 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 TROAPQ12815 778 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 GPS2Q13227 327 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 TUBB2AQ13885 445 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 RCN2Q14257 317 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 PTPRCAPQ14761 206 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 RRS1Q15050 365 aaKnown RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 CDC37Q16543 378 aaPredicted RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 AMZ1Q400G9 498 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 KRTCAP3Q53RY4 240 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 MTX3Q5HYI7 312 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 DNTTIP2Q5QJE6 756 aaKnown RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 LCN10Q6JVE6 187 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 IYDQ6PHW0 289 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 RAD9BQ6WBX8 426 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 COLCA1Q6ZS62 124 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 DET1Q7L5Y6 550 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ATG9AQ7Z3C6 839 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 IRF2BP2Q7Z5L9 587 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 PIP4P1Q86T03 277 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 HOOK3Q86VS8 718 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ZNF34Q8IZ26 560 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 SLC5A8Q8N695 610 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ANKRD13CQ8N6S4 541 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 OR5R1Q8NH85 324 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 C16orf52Q8NHV5 167 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 CTCFLQ8NI51 663 aaPredicted RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 GRK7Q8WTQ7 553 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 SLC38A5Q8WUX1 472 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 WASF1Q92558 559 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 CORO2AQ92828 525 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 SPSB1Q96BD6 273 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 COQ8BQ96D53 544 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 OTUB1Q96FW1 271 aaPredicted RBP3.58□□□□□ -1.84
CALD1-224ENST00000498254 NEK1Q96PY6 1258 aa3.58□□□□□ -1.84
CALD1-224ENST00000498254 OR6C1Q96RD1 312 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms