RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SKA1Q96BD8 255 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 PGAM5Q96HS1 289 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 SEMA6AQ9H2E6 1030 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 TRMT1Q9NXH9 659 aaKnown RBP3.55□□□□□ -1.84
CD46-218ENST00000496723 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.55□□□□□ -1.84
CD46-218ENST00000496723 TSPYL4Q9UJ04 414 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 CMAHPQ9Y471 501 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 JRKLQ9Y4A0 524 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 YIPF1Q9Y548 306 aa3.55□□□□□ -1.84
CD46-218ENST00000496723 TMEM8BA6NDV4 472 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 C15orf62A8K5M9 175 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 PMS2P5A8MQ11 134 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 PTP4A3O75365 173 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 AMBPP02760 352 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 RB1P06400 928 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 LIPFP07098 398 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 CAPN3P20807 821 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 PON1P27169 355 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 TM4SF1P30408 202 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 HOXA13P31271 388 aaPredicted RBP3.54□□□□□ -1.84
CD46-218ENST00000496723 HADHAP40939 763 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 CRIP2P52943 208 aaPredicted RBP3.54□□□□□ -1.84
CD46-218ENST00000496723 PPP2R2BQ00005 443 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 ASPRV1Q53RT3 343 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 WDR38Q5JTN6 314 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 ZDHHC20Q5W0Z9 365 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 SLC35E4Q6ICL7 350 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 CEACAM20Q6UY09 585 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 PACS1Q6VY07 963 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 C1orf122Q6ZSJ8 110 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 ZNF534Q76KX8 674 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 OR10V1Q8NGI7 309 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 ZNF501Q96CX3 271 aaPredicted RBP3.54□□□□□ -1.84
CD46-218ENST00000496723 C17orf77Q96MU5 243 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 DUX3Q96PT4 197 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 SRSF8Q9BRL6 282 aaKnown RBP3.54□□□□□ -1.84
CD46-218ENST00000496723 C1QTNF1Q9BXJ1 281 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 SCRT2Q9NQ03 307 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 PAG1Q9NWQ8 432 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 NENFQ9UMX5 172 aa3.54□□□□□ -1.84
CD46-218ENST00000496723 ITIH6Q6UXX5 1313 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 A0A1W2PPI3 338 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 OR2M5A3KFT3 312 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 PTGES3LE9PB15 166 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 H0YIN7 160 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 PLK4O00444 970 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 AP3D1O14617 1153 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
CD46-218ENST00000496723 PAK4O96013 591 aaPredicted RBP3.53□□□□□ -1.84
CD46-218ENST00000496723 SELLP14151 372 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 GARSP41250 739 aaKnown RBP3.53□□□□□ -1.84
CD46-218ENST00000496723 KIR2DS3Q14952 304 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 DUOXA1Q1HG43 343 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 NDUFAF5Q5TEU4 345 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SFMBT2Q5VUG0 894 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 ANO5Q75V66 913 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 PTOV1Q86YD1 416 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 GALNT13Q8IUC8 556 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 ARID3BQ8IVW6 561 aaPredicted RBP3.53□□□□□ -1.84
CD46-218ENST00000496723 SCYL3Q8IZE3 742 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 ADGRF2Q8IZF7 708 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 STPG4Q8N801 248 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 CNBD1Q8NA66 436 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 TM9SF4Q92544 642 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD46-218ENST00000496723 ZNF524Q96C55 264 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 DDOQ99489 341 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SLX1AQ9BQ83 275 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 HGH1Q9BTY7 390 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SMARCAD1Q9H4L7 1026 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 DNAJC18Q9H819 358 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SLC38A7Q9NVC3 462 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 PNMA2Q9UL42 364 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SMCHD1A6NHR9 2005 aa3.53□□□□□ -1.84
CD46-218ENST00000496723 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 CIDEAO60543 219 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 ZBED4O75132 1171 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 CAVIN2O95810 425 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 GH2P01242 217 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 NR3C1P04150 777 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 INHBAP08476 426 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 MSH3P20585 1137 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 RXRGP48443 463 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 MMP15P51511 669 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 TECRLQ5HYJ1 363 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 SMPDL3BQ92485 455 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 SEMA4DQ92854 862 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 PRMT6Q96LA8 375 aaPredicted RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 F2RL3Q96RI0 385 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 CHCHD6Q9BRQ6 235 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 BICC1Q9H694 974 aaKnown RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 DENND2DQ9H6A0 471 aaPredicted RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 ZNF696Q9H7X3 374 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 APOBEC3GQ9HC16 384 aaKnown RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
CD46-218ENST00000496723 LAS1LQ9Y4W2 734 aaKnown RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.52□□□□□ -1.85
CD46-218ENST00000496723 A0A1W2PR77 199 aa3.51□□□□□ -1.85
CD46-218ENST00000496723 ZG16O60844 167 aa3.51□□□□□ -1.85
CD46-218ENST00000496723 GCNT3O95395 438 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms