RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 HAUS5O94927 633 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 VCLP18206 1134 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 FMO4P31512 558 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 GP5P40197 560 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 RXRGP48443 463 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 CSE1LP55060 971 aaKnown RBP18.06■□□□□ 0.48
TSSC4-210ENST00000496468 BRD3Q15059 726 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 ELOCQ15369 112 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 CNSTQ6PJW8 725 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
TSSC4-210ENST00000496468 DCLK2Q8N568 766 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 LMX1AQ8TE12 382 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 ATXN7L3BQ96GX2 97 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 BIRC8Q96P09 236 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 GSDMCQ9BYG8 508 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 CAAP1Q9H8G2 361 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 TM7SF3Q9NS93 570 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 COMMD10Q9Y6G5 202 aa18.06■□□□□ 0.48
TSSC4-210ENST00000496468 AQP9O43315 295 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 AHSGP02765 367 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 GSTM1P09488 218 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 PKMP14618 531 aaKnown RBP18.05■□□□□ 0.48
TSSC4-210ENST00000496468 GABRB3P28472 473 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 HSD17B3P37058 310 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 GSTM4Q03013 218 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 ILF2Q12905 390 aaKnown RBP18.05■□□□□ 0.48
TSSC4-210ENST00000496468 SLC29A2Q14542 456 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 SHBQ15464 509 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 UAP1Q16222 522 aaPredicted RBP18.05■□□□□ 0.48
TSSC4-210ENST00000496468 SYTL3Q4VX76 610 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 C11orf96Q7Z7L8 435 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 AMZ2Q86W34 360 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 MREGQ8N565 214 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 GPATCH11Q8N954 259 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 HM13Q8TCT9 377 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 LKAAEAR1Q8TD35 194 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 LINC00615Q96LM1 132 aaPredicted RBP18.05■□□□□ 0.48
TSSC4-210ENST00000496468 PANX3Q96QZ0 392 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 CCM2Q9BSQ5 444 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 OSGEPL1Q9H4B0 414 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 RHOJQ9H4E5 214 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 FAM8A1Q9UBU6 413 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 KCNK6Q9Y257 313 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 DNAJC16Q9Y2G8 782 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 OTOGLQ3ZCN5 2332 aa18.05■□□□□ 0.48
TSSC4-210ENST00000496468 KLHL33A6NCF5 533 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 E5RI56 91 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 NIPSNAP2O75323 286 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 POP7O75817 140 aaKnown RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 CELA2BP08218 269 aaPredicted RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 ITGB6P18564 788 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 ACTR1BP42025 376 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 ACTR1AP61163 376 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 CTBSQ01459 385 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 C1orf61Q13536 156 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 ZNF549Q6P9A3 640 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 SLC30A9Q6PML9 568 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 ZC3HC1Q86WB0 502 aaKnown RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 GKN2Q86XP6 184 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 KRT222Q8N1A0 295 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 OR2L2Q8NH16 312 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 CCL4L1Q8NHW4 92 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 MRRFQ96E11 262 aaKnown RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 VPS39Q96JC1 886 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 PAFAH2Q99487 392 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 NDNQ99608 321 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 RBBP8Q99708 897 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 AARSD1Q9BTE6 412 aaKnown RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 KLC4Q9NSK0 619 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 DOLKQ9UPQ8 538 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 DNMT3AQ9Y6K1 912 aaPredicted RBP18.04■□□□□ 0.48
TSSC4-210ENST00000496468 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
TSSC4-210ENST00000496468 PIKFYVEQ9Y2I7 2098 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 MGAT4DA6NG13 374 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 IQCF5A8MTL0 148 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 TRIM16O95361 564 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 INHBAP08476 426 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 ZNF883P0CG24 379 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 DGKAP23743 735 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 AK4P27144 223 aaPredicted RBP18.03■□□□□ 0.48
TSSC4-210ENST00000496468 LIMK2P53671 638 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 DMPKQ09013 629 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 BOP1Q14137 746 aaKnown RBP18.03■□□□□ 0.48
TSSC4-210ENST00000496468 TMED2Q15363 201 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 RBM20Q5T481 1227 aaKnown RBP18.03■□□□□ 0.48
TSSC4-210ENST00000496468 GRTP1Q5TC63 336 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 FAM45BPQ6NSW5 357 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 TAOK1Q7L7X3 1001 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 TAF8Q7Z7C8 310 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 FAM45AQ8TCE6 357 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 GPBAR1Q8TDU6 330 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 ELMO1Q92556 727 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 KCNJ9Q92806 393 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 ELMO2Q96JJ3 720 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 TMEM9BQ9NQ34 198 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 DNAAF2Q9NVR5 837 aaKnown RBP18.03■□□□□ 0.48
TSSC4-210ENST00000496468 UCKL1Q9NWZ5 548 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 SLC23A2Q9UGH3 650 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 PLEKHM1Q9Y4G2 1056 aa18.03■□□□□ 0.48
TSSC4-210ENST00000496468 ZFC3H1O60293 1989 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms