RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	MACROD2	A1Z1Q3	448 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	HACD1	B0YJ81	288 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	CAPN5	O15484	640 aa	Predicted RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	NKX2-8	O15522	239 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	SGTA	O43765	313 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	NDUFA10	O95299	355 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	TIAF1	O95411	115 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	PRAMEF1	O95521	474 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	EPO	P01588	193 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	PRKAR1A	P10644	381 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	OAS2	P29728	719 aa	Known RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	PBLD	P30039	288 aa	Predicted RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	ZNF75D	P51815	510 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	DMPK	Q09013	629 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	MSLN	Q13421	630 aa	Predicted RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	CCDC70	Q6NSX1	233 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	CEACAM20	Q6UY09	585 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	CERS6	Q6ZMG9	384 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	FAM92B	Q6ZTR7	304 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	BZW1	Q7L1Q6	419 aa	Known RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	DET1	Q7L5Y6	550 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	PRICKLE2	Q7Z3G6	844 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	PLXDC1	Q8IUK5	500 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	TRIM48	Q8IWZ4	208 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	RCOR2	Q8IZ40	523 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	TEFM	Q96QE5	360 aa	Known RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	VAT1	Q99536	393 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	EPB41L1	Q9H4G0	881 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	POT1	Q9NUX5	634 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	SMOX	Q9NWM0	555 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	FKBPL	Q9UIM3	349 aa		11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	CFAP20	Q9Y6A4	193 aa	Known RBP	11.42	□□□□□ -0.58
VTI1A-208	ENST00000494728	SEC16A	O15027	2179 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	GRID2IP	A4D2P6	1211 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728		H7C0C1	242 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	CCL22	O00626	93 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	POLR1C	O15160	346 aa	Predicted RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	MTSS1	O43312	755 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	POP7	O75817	140 aa	Known RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	IDS	P22304	550 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	STAT5A	P42229	794 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	ATP5O	P48047	213 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	XIAP	P98170	497 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	FOXM1	Q08050	763 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	RPE65	Q16518	533 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	DENND5A	Q6IQ26	1287 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	TMEM220	Q6QAJ8	160 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	WASH2P	Q6VEQ5	465 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	PRSS42	Q7Z5A4	293 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	TMEM139	Q8IV31	216 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	CCDC170	Q8IYT3	715 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	NLGN4X	Q8N0W4	816 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	LRRC57	Q8N9N7	239 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	ZSCAN1	Q8NBB4	408 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	OR13C4	Q8NGS5	318 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	CCDC110	Q8TBZ0	833 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	DTX3L	Q8TDB6	740 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	ELMO2	Q96JJ3	720 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	SLC45A3	Q96JT2	553 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	OR6C1	Q96RD1	312 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	SRPK1	Q96SB4	655 aa	Known RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	NRTN	Q99748	197 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	ARHGAP9	Q9BRR9	750 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	FSD1L	Q9BXM9	530 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	OSBPL8	Q9BZF1	889 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	RBSN	Q9H1K0	784 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	ZNF768	Q9H5H4	540 aa	Known RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	WASH6P	Q9NQA3	447 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	HACD3	Q9P035	362 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	FAM8A1	Q9UBU6	413 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	PCDHA3	Q9Y5H8	950 aa		11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.41	□□□□□ -0.58
VTI1A-208	ENST00000494728	PCSK5	Q92824	1860 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	CCDC88C	Q9P219	2028 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	TERT	O14746	1132 aa	Known RBP	11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	KCNN4	O15554	427 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	PRSS56	P0CW18	603 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	PYGM	P11217	842 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	CTNNA2	P26232	953 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	PTPN7	P35236	360 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	CYLC1	P35663	651 aa	Predicted RBP	11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	ZNF140	P52738	457 aa	Predicted RBP	11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	POLE2	P56282	527 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	CDC20	Q12834	499 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	XRCC4	Q13426	336 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	GTF2H3	Q13889	308 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	SPARCL1	Q14515	664 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	KCNAB1	Q14722	419 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	SPA17	Q15506	151 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	ANKRD20A2	Q5SQ80	823 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	LDLRAP1	Q5SW96	308 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	FNBP1L	Q5T0N5	605 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	ANKRD20A1	Q5TYW2	823 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	ANKRD20A3	Q5VUR7	823 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	IRGC	Q6NXR0	463 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	BORA	Q6PGQ7	559 aa		11.4	□□□□□ -0.58
VTI1A-208	ENST00000494728	RANBP10	Q6VN20	620 aa		11.4	□□□□□ -0.58

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